Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01321 ATGGCTTCCTTAACCCTCCTTATACCAACACTTGTCTCTCTTCAATTTCATCTTCTTTCTTTAGCTTTTGCAAACATTGATATTAGTTCCCAAATTTCCACCGATGATAATGATGTGTGGCGTTCTCCATCGGGTCATTTTGCCTTTGGGTTTCGCTCATTGAATAATGATACTGATCCCAATAAGAAGCTGTTCATGGTTGCCATATGGTACGACATGATACCCGACAAGACCGTTGTTTGGAGTGCAAAAACAGACAACAAACTTGCAACAGCACCAACGGGATCACAGGTTCGGATCACATCAGCGGGGATAACACTGGCAGGTCCCAAAGGAGATTCCATATGGACGTCAAACTTGGAAGGTATTCTTGTCTCCGTAGGATCTATGCTTGACACTGGCAACTTTGTTCTACTCAATCACAACTCTGAAAAGCTGTGGCAAAGCTTTGAGAACCCCACAGACACCTTGTTGCCTAACCAATCTCTCCAACTCGAAGGCATGCTAACTTCTCGATTGACAGACACCAATTACACAAGTGGAAGGTTCCAACTTTATTTCAAGGATGGTAATGTGTCACTGAGTCCTCTTGCATGGCCTTCTCCACTGAAATACAACTCTTATTATGTGTTGGATGCCTCTGGTGCTGCTTCAACATTGGTGTTCAATGAGTCTGGGGATATCTATGTAAAGACCACAAATGGGACTACAATCCAACCTCAAGGTTCGCAATGGAATAGCTCGGATCTCGATCCTGAGGTGAATTACTACAGAGCAACCCTTGACTTCAGTGGAGTTTTCACGCAGTATTATCATCCACGGAGCAGCACTGCTCAACCAGGGTGGAGAATCATGAGGTATGTTCCCGATAACATTTGCAATGCAATATCTTATCAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAATCATAGGCCTACCTGCAAATGCCCTTATGGGTATTCGCTGTTGGATCCAAGTAATCAATTTGGTGGATGCCAACCCAATTTCACCCTCGCTTGTGGAGCCGATGTTCAAACCCCGCCAGAGGAACTATATGAAATGCATGCCGCTCGAGATTTTAATTTTCCTCTGGGGGATTATGAAAGGATACAACCTTACTCTAGCCAGGAATGCCAGCAATTTTGCTTGCAGGATTGCATGTGTGCTATGGTCGTTTTAGGAGGCGACACTTGTTGGCTGAAGAGATTTCCCCTTGGTAACGGTAGACAAGAACCAGTCCAAGATCTACATTTTGTCTATATCAAAACAAGAGTTATTCGTGACTTTTATCCAGACGGGGAACTTTCCCCTCCTCCTGATTCAAAGAAAGAATACAACGCTAAGTTGTTTCTTTTGGGTCCCCTACTTGGTTCTCTTGTCCTTAACAGTATTCTCGTTGCTACAGTTGCTTTGTTTGTTCTCATGAAGAAAAAAGCGAATAGGGTCTCCACACCTGCCATTAGTCCTTTGGAAACAAATTTGCATTCATTTACTTATGAAAAATTGGAAAATGCAACACAGAATTTTAAGGAGGAAATAGGCAGAGGTTCTTATGGCCTTGTTTACAAAGGGCAACTAGAAGCAGGTTCTTGTGATCTGGTTGCTGTGAAGAGATTGGACAGATTGGCACAAGAACGAGAGAAAGAATTTAGGACTGAATTGAGTTCCATTGGTAGAACCTGCCACAAAAATCTGGTCAGGTTGATTGGATTTTGTGATGAGGGAATCAATAGGATATTGGTGTACGAGTTCATGAGCAATGGTAATCTTGCAGACATCCTGTTTGGACAATCCAAACCCAAATGGAATGTAAGGGTTGGATTTGCTCTGGGGATTGCAAGGGGGTTGGTGTACTTGCACGAAGAGTGTGACACTCCCATTATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGAGTACTTCAATCCAAAGATATCTGACTTTGGGCTGGCCAAGTTGTTGTTGTCTGACCAAAGTAGAACCACCACTATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTGCTGTGACGGTTAAAGTGGATGTTTACAGCTTTGGGGTAATGTTGTTGGAAATTATTTGCAGCAGAAGAAGTGTGTTGATGATGGAGTCCGGGGAAGAAGAGAAGGCATTGTTGACAGATTGGGCTTGTGATTGCTTTATGGAAGGGAGAATAGATGTTCTGGTGGAGAATGATGAAGAGGCCTTATCTGACTATGTGAGGCTACAAAAATGGGTAAAAGTAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGACCAACAATGGGGACGGTCTTGCAAATGCTAGAAGGCTTTGTTGAAGTCCCTAACCCACCATCTCCGTTTCTCGTATGTTCCATGCCTTAA 2412 0.4316 MASLTLLIPTLVSLQFHLLSLAFANIDISSQISTDDNDVWRSPSGHFAFGFRSLNNDTDPNKKLFMVAIWYDMIPDKTVVWSAKTDNKLATAPTGSQVRITSAGITLAGPKGDSIWTSNLEGILVSVGSMLDTGNFVLLNHNSEKLWQSFENPTDTLLPNQSLQLEGMLTSRLTDTNYTSGRFQLYFKDGNVSLSPLAWPSPLKYNSYYVLDASGAASTLVFNESGDIYVKTTNGTTIQPQGSQWNSSDLDPEVNYYRATLDFSGVFTQYYHPRSSTAQPGWRIMRYVPDNICNAISYQYGSGSCGYNSYCSMENHRPTCKCPYGYSLLDPSNQFGGCQPNFTLACGADVQTPPEELYEMHAARDFNFPLGDYERIQPYSSQECQQFCLQDCMCAMVVLGGDTCWLKRFPLGNGRQEPVQDLHFVYIKTRVIRDFYPDGELSPPPDSKKEYNAKLFLLGPLLGSLVLNSILVATVALFVLMKKKANRVSTPAISPLETNLHSFTYEKLENATQNFKEEIGRGSYGLVYKGQLEAGSCDLVAVKRLDRLAQEREKEFRTELSSIGRTCHKNLVRLIGFCDEGINRILVYEFMSNGNLADILFGQSKPKWNVRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYFNPKISDFGLAKLLLSDQSRTTTMIRGTRGYVAPEWFKNVAVTVKVDVYSFGVMLLEIICSRRSVLMMESGEEEKALLTDWACDCFMEGRIDVLVENDEEALSDYVRLQKWVKVAIWCIHEQPEMRPTMGTVLQMLEGFVEVPNPPSPFLVCSMP 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01321 803 ProSitePatterns Protein kinases ATP-binding region signature. 519 543 IPR017441 GO:0005524
Phco4g01321 803 Pfam D-mannose binding lectin 78 166 IPR001480 -
Phco4g01321 803 Gene3D - 152 279 IPR036426 -
Phco4g01321 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 189 IPR036426 -
Phco4g01321 803 SUPERFAMILY Protein kinase-like (PK-like) 489 785 IPR011009 -
Phco4g01321 803 SMART serkin_6 513 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01321 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 792 - -
Phco4g01321 803 PIRSF SRK 1 802 IPR024171 GO:0004674
Phco4g01321 803 Gene3D - 24 151 IPR036426 -
Phco4g01321 803 SMART blect_4 30 153 IPR001480 -
Phco4g01321 803 Gene3D Transferase(Phosphotransferase) domain 1 591 789 - -
Phco4g01321 803 ProSiteProfiles Bulb-type lectin domain profile. 25 151 IPR001480 -
Phco4g01321 803 Gene3D Phosphorylase Kinase; domain 1 476 590 - -
Phco4g01321 803 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 33 796 - -
Phco4g01321 803 CDD STKc_IRAK 519 787 - -
Phco4g01321 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Phco4g01321 803 FunFam S-receptor-like serine/threonine-protein kinase 482 590 - -
Phco4g01321 803 ProSiteProfiles Protein kinase domain profile. 513 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01321 803 Pfam Protein kinase domain 515 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01321 Phco-Chr4 11322303 11324714 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco4g01321 Pkinase 2.2e-48 CL0016