Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01319 ATGGCTTCCTTTACCCTCCTTATACCAACAATTATCTCTCTTCAATTTCATCTTCTCTCCTTAGCTTTTGCAAACGTTAATATTGATTCCGCACTTTCCACCGATCACAATGGTGTTTGGCGTTCACCTTCCGGTCATTTTGCCTTTGGGTTTCGCCCATTCAATAATTATACAAATCCCGAAACCAAGCTGTTCATGGTTGCCATATGGTACGACATGATACCCGACAAGACCATTGTTTGGAGTGCAAAAACAGAAAACAAACTTGCAACAGCACCAACGGGATCACAGGTTCGGATCACATCAGCGGGGCTAACACTGGCAGGTCCCAAAGGAGATTCCATATGGACGGCAAATTCGGTAGGTACTGTATCCGTAGGATCTATGCTTGACACTGGCAACTTTGTTCTCCTGAATCAAAACTCTGAAAAGCTGTGGCAAAGCTTTGAGAACCCCACAGACACCTTGTTGCCTGACCAATCTCTCCAACTCGGAGGCATCCTAACTTCTCGATTGACAGACACCAATTACACAAGTGGAAGGTTCCAACTTTATTTCAAGGATGGTAATGTGTTACTGAGTCCTCTTGCATGGCCTACTCCACAGAAATACAACTCTTATTATGTGTTGAATGCCTCTGGTGCTGCTTCAACATTAGTGTTCAATGAGTCTGGGGATATCTATGTAAAGACCACAAATGGGACTACAATCCAACCTCAAGGTTCGCAATGGAATAGCTCGGATCTCGATCCTGAGGTGAATTACTACCGAGCAACCCTTGACTTCAGTGGAGTTTTCACACAGTATTATCATCCACGGAACAGCACTGCTCAACCAGGGTGGAGAATCATGAGGTATGTTCCTGGCGACATTTGCAATGCAATATTTAACGAGTATGGTAGCGGTTCCTGTGGCTATAATAGCTACTGCTCCATGGAAAAAAGTAGGCCTACCTGCAAATGCCCTTATGGGTATTCGCTGTTGGATCCAAGTAATCAATTTGGTGGATGCCAACCCAATTTCACCCTCGCTTGTGGAGCCGATGTTCAAACACCGCCAGAGGAACTATATGAAATGCTTGCCTCTCGAGATTTTGATTTTCCTTTGGGGGATTATGAAAGCATGGAACCTTACTCTAGACAGGAATGCCAGCAATTTTGCTTGCAGGATTGCATGTGTGCTATGGCCATTTCAGGAGGCGACACTTGTTGGCTGAAAAGATTTCCCCTTGGTAACGGTAGACAACTAACAGTCAGTGATAAAAGATTTGTGTATATCAAAACAAGAGTTATTCGTGACTTTTATCCAGACGGGGAACTTTCCCCTCCTCCGGATTCAAAGAAAGAATATAAAGCTAAGTTGTTTCTTTTGGGACCACTTATTGGTTCTCTTGTCCTTAACAGTATTCTCCTCGCTACATTTGCTTTGTTTATTCTCATGAAGCCGAAAGTGAAAAGGGTTCCCATAGCTTCTTCTAGTCCTTTGGAAACAAATTTGCATTCGTTTACTTATGAAGCATTGGAAAAGGCCACATGGAATTTTAAGGAGGAAATAGGCAGAGGTTCTTATGGTCTTGTTTACAAAGGGCAACTAGAAGCAGGTTCTTGTCATCTGGTTGCTGTGAAGAGATTGGACAGATTGGCACAGGAACGAGAGAAAGAATTTAGGACTGAATTGAGTTCCATTGGTAGAACCTGCCACAAAAATCTGGTCAGGTTGATTGGATTTTGTGATGAGGGAATCAATAGGATATTGGTGTACGAGTTCATGAGCAATGGTAGTCTTGCAGACATCCTGTTTGGACAATCCAAGCCCAAATGGAATGTAAGGGTTGGATTCGCTCTGGGGATTGCAAGAGGGTTGGTGTACTTGCACGAAGAGTGTGACACTCCCATTATTCATTGTGATATAAAACCTCAAAATATACTCATAGATGAGTACTTCAATCCAAAGATATCTGACTTTGGGCTGGCCAAGTTGTTGTTGTCTGACCAAAGTAGAACCACCACTATGATCCGAGGAACTCGAGGATATGTGGCTCCTGAATGGTTCAAGAATGTTGCTGTGACGGTTAAAGTGGATATTTACAGCTTTGGGGTAATGTTGTTGGAAATAATTTGCAGCAGAAGAAGTGTGTTGATGATGGAGTCCGGGGAAGAAGAGAAGGCATTGCTGACAGATTGGGCTTGTGATTGCTTTATGGAAGGGAAAATAGATGTTCTTGTAGAGAATGATGAAGAGGCCTTATCTGACTGTGTAAGGCTACAAAAATGGGTAAAAATAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGACCAACAATGGGGATGGTCATGCAAATGCTAGAAGGCTTTGTTGAAGTCCCCAACCCACCATCTCCTCTTCTCATACGTTCCATGTCTACCTAA 2412 0.4312 MASFTLLIPTIISLQFHLLSLAFANVNIDSALSTDHNGVWRSPSGHFAFGFRPFNNYTNPETKLFMVAIWYDMIPDKTIVWSAKTENKLATAPTGSQVRITSAGLTLAGPKGDSIWTANSVGTVSVGSMLDTGNFVLLNQNSEKLWQSFENPTDTLLPDQSLQLGGILTSRLTDTNYTSGRFQLYFKDGNVLLSPLAWPTPQKYNSYYVLNASGAASTLVFNESGDIYVKTTNGTTIQPQGSQWNSSDLDPEVNYYRATLDFSGVFTQYYHPRNSTAQPGWRIMRYVPGDICNAIFNEYGSGSCGYNSYCSMEKSRPTCKCPYGYSLLDPSNQFGGCQPNFTLACGADVQTPPEELYEMLASRDFDFPLGDYESMEPYSRQECQQFCLQDCMCAMAISGGDTCWLKRFPLGNGRQLTVSDKRFVYIKTRVIRDFYPDGELSPPPDSKKEYKAKLFLLGPLIGSLVLNSILLATFALFILMKPKVKRVPIASSSPLETNLHSFTYEALEKATWNFKEEIGRGSYGLVYKGQLEAGSCHLVAVKRLDRLAQEREKEFRTELSSIGRTCHKNLVRLIGFCDEGINRILVYEFMSNGSLADILFGQSKPKWNVRVGFALGIARGLVYLHEECDTPIIHCDIKPQNILIDEYFNPKISDFGLAKLLLSDQSRTTTMIRGTRGYVAPEWFKNVAVTVKVDIYSFGVMLLEIICSRRSVLMMESGEEEKALLTDWACDCFMEGKIDVLVENDEEALSDCVRLQKWVKIAIWCIHEQPEMRPTMGMVMQMLEGFVEVPNPPSPLLIRSMST 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01319 803 CDD STKc_IRAK 518 786 - -
Phco4g01319 803 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 794 - -
Phco4g01319 803 ProSiteProfiles Bulb-type lectin domain profile. 25 150 IPR001480 -
Phco4g01319 803 Gene3D Phosphorylase Kinase; domain 1 479 589 - -
Phco4g01319 803 FunFam S-receptor-like serine/threonine-protein kinase 483 589 - -
Phco4g01319 803 PIRSF SRK 1 803 IPR024171 GO:0004674
Phco4g01319 803 SUPERFAMILY Protein kinase-like (PK-like) 491 784 IPR011009 -
Phco4g01319 803 Pfam D-mannose binding lectin 78 164 IPR001480 -
Phco4g01319 803 ProSitePatterns Protein kinases ATP-binding region signature. 518 542 IPR017441 GO:0005524
Phco4g01319 803 Pfam Protein kinase domain 513 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01319 803 SMART blect_4 31 152 IPR001480 -
Phco4g01319 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 199 IPR036426 -
Phco4g01319 803 Gene3D Transferase(Phosphotransferase) domain 1 590 788 - -
Phco4g01319 803 FunFam Serine/threonine-protein kinase 153 295 - -
Phco4g01319 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Phco4g01319 803 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 791 - -
Phco4g01319 803 ProSiteProfiles Protein kinase domain profile. 512 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01319 803 Gene3D - 152 279 IPR036426 -
Phco4g01319 803 SMART serkin_6 512 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01319 803 Gene3D - 24 150 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01319 Phco-Chr4 11296005 11298416 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco4g01319 Pkinase 8e-49 CL0016