Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01296 ATGGAGGAAGAACGGTACGAGACTCTGAAGGAGCTTGGTTCGGGGAACTTTGGAGTGGCAAGGTTGGCCAAAGACAAGAAGACAGGGGAACTTGTTGCTATCAAATATATAGAAAGGGGAACAAAGATTGATGCGAATGTCCAAAGGGAGATAGTAAACCACCGATCTCTAAGGCATCCGAATATTATTAGGTTCAAAGAGGTATTTCTGACCCATACTCATTTAGCTATTGTCCTGGAGTATGCTGCTGGAGGTGAACTCTTCGAGAGGATATGCAATGCTGGTCGATTGAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATATCTGGAGTTAGCTATTGTCATTCCATGCAAATATGTCATAGAGATCTGAAACTGGAAAACACTCTACTTGATGAAAATCCAGCTCCTAGACTTAAAATATGTGACTTTGGTTTCTCCAAGTCTGCTTTGCTGCACTCTCAGCCTAAGTCAACAGTTGGAACTCCTGCATACATTGCTCCAGAAGTTTTGTCACGAAAGGAATATGATGGAAAGATTGCAGATGTTTGGTCGTGTGGTGTGACTCTTTATGTGATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAAGAATTTCAGAAAGAGTATTGGGAGAATTATGAGTGTTCAATACGCCATACCCGACTATGTACGTGTTTCCAAGGAGTGCAGACATCTTATCTCTTGTATTTTTGTTGCTAATCCTGCAAAGAGGATCACGATGTCGGAGATAAAACAACACCTTTGGTTTAGGAAGAACTTGGCAAGGGAGATAATTGAGGGTGAAAGAAGGGGTTACGAGGAAACCCAAAAGGAACAACCAAGCCAAAGTGTGGAAGAAGTAATGAAAATCATAGATGAAGCAAGGACAAAAATCCACACTAGTGAGCAAACTTCCACAGGATCGTCAAATGTTCATGGTGATGAGGCTAATGAGGAACTTAATGACCACTTTACCAAATATGTAGCCCTTCAGTAA 1014 0.4142 MEEERYETLKELGSGNFGVARLAKDKKTGELVAIKYIERGTKIDANVQREIVNHRSLRHPNIIRFKEVFLTHTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDENPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKSIGRIMSVQYAIPDYVRVSKECRHLISCIFVANPAKRITMSEIKQHLWFRKNLAREIIEGERRGYEETQKEQPSQSVEEVMKIIDEARTKIHTSEQTSTGSSNVHGDEANEELNDHFTKYVALQ 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01296 337 CDD STKc_SnRK2 5 261 - -
Phco4g01296 337 PANTHER SERINE/THREONINE KINASE 4 306 - -
Phco4g01296 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Phco4g01296 337 FunFam Serine/threonine-protein kinase SRK2E 82 270 - -
Phco4g01296 337 Pfam Protein kinase domain 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01296 337 MobiDBLite consensus disorder prediction 304 325 - -
Phco4g01296 337 Gene3D Transferase(Phosphotransferase) domain 1 82 270 - -
Phco4g01296 337 SUPERFAMILY Protein kinase-like (PK-like) 4 278 IPR011009 -
Phco4g01296 337 ProSiteProfiles Protein kinase domain profile. 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01296 337 MobiDBLite consensus disorder prediction 306 320 - -
Phco4g01296 337 FunFam Serine/threonine-protein kinase SRK2E 1 81 - -
Phco4g01296 337 SMART serkin_6 6 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01296 337 Gene3D Phosphorylase Kinase; domain 1 1 81 - -
Phco4g01296 337 ProSitePatterns Protein kinases ATP-binding region signature. 12 35 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01296 Phco-Chr4 11110929 11114024 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Phco4g01296 Pkinase 1.3e-73 CL0016