Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01291 ATGAACTGTTTCTTCTTCAAAAAGAAATCAAAATCCCACCCAGAACTTCCAAAGGGACGGAAGAAGAAAAGTCAGGTGGTGAATGGAGCACCAAAGTCCCCCAGCTCGGTACCATCGCTGAGGAGCATAAAAGAATTGTACAAAGAGAAGGAGCAGAGTTTCAGAATTTTCAGTTTAAAAGAGCTGGTAGATGCAACAAATGGTTTCAATAGGATGCTCAAGATTGGAGAAGGTGGTTTTGGAAAAGTATACAGAGGAACCATTAGTCCTCACCCTGAAGATGGAGCTGCTCCAATTGTAGTCGCAATAAAAAAACTTAACAACCATGGCTTGCAGGGGCATAAAGAATGGCTTGCAGAAGTTCAATTTCTGAGCGTTGCTAACCACCCCAATTTGGTTAAGCTTCTTGGATACTGCTCTATAGACAGTCAAAGAGGAATCCAACGATTGTTGGTATATGAGTTCATGTCTAACAGGAGTCTAGAAGATCATCTTTTCAGTGTTTCTTTACCTCATTTGCCTTGGCCAACAAGACTGCAGATCATGCTCGGTGCTGCTCAAGGATTGTATTATCTACATAACGGATTGGAGATTCAGGTGATCTATCGAGATTTCAAATCTTCAAATGTGTTATTGGACAAGCAATTTCATCCCAAACTTTCAGATTTTGGTCTTGCAAGGGAGGGCCCAACAGGTGATAAGACTCATGTATCTACTGCGGTAGTGGGGACACAGGGATATGCTGCCCCAGAGTATGTTCAGACGGGCCATCTCAAAGTTCAGAGTGATATTTGGAGTTTTGGTGTGGTGCTTTATGAGATCCTCACAGGGAGACGTGCATTGAATAGAAACCGTCCAATAGGGGAACAAAAGCTTGTAGAATGGGTTAAAAACTACCCTGCTAACAGTAGCAGGTTCAACACGATCATTGACCCACGTCTCAAGAACCAATACTCTCTTGGTGCAGCTCGGAAAGTAGCCAACTTGGCAGATTGCTGCTTGAAGAAGAATCCTGAAGACAGACCCTCCATGAATCAGATAGTGGAAAGCTTGAAGCAAGCATTGCAGGATTCAGAAACCAAAAACACTTCGCCTAATATGACTTCCAAATCCACACGATTGAGATTGGTCTCAACTAGTAAATAA 1146 0.4276 MNCFFFKKKSKSHPELPKGRKKKSQVVNGAPKSPSSVPSLRSIKELYKEKEQSFRIFSLKELVDATNGFNRMLKIGEGGFGKVYRGTISPHPEDGAAPIVVAIKKLNNHGLQGHKEWLAEVQFLSVANHPNLVKLLGYCSIDSQRGIQRLLVYEFMSNRSLEDHLFSVSLPHLPWPTRLQIMLGAAQGLYYLHNGLEIQVIYRDFKSSNVLLDKQFHPKLSDFGLAREGPTGDKTHVSTAVVGTQGYAAPEYVQTGHLKVQSDIWSFGVVLYEILTGRRALNRNRPIGEQKLVEWVKNYPANSSRFNTIIDPRLKNQYSLGAARKVANLADCCLKKNPEDRPSMNQIVESLKQALQDSETKNTSPNMTSKSTRLRLVSTSK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01291 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Phco4g01291 381 Gene3D Transferase(Phosphotransferase) domain 1 156 376 - -
Phco4g01291 381 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 156 365 - -
Phco4g01291 381 Pfam Protein tyrosine and serine/threonine kinase 74 351 IPR001245 GO:0004672|GO:0006468
Phco4g01291 381 SUPERFAMILY Protein kinase-like (PK-like) 51 351 IPR011009 -
Phco4g01291 381 CDD STKc_IRAK 75 353 - -
Phco4g01291 381 MobiDBLite consensus disorder prediction 8 36 - -
Phco4g01291 381 Gene3D Phosphorylase Kinase; domain 1 48 155 - -
Phco4g01291 381 PANTHER OS01G0588500 PROTEIN-RELATED 29 356 - -
Phco4g01291 381 ProSiteProfiles Protein kinase domain profile. 69 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01291 381 MobiDBLite consensus disorder prediction 351 381 - -
Phco4g01291 381 ProSitePatterns Protein kinases ATP-binding region signature. 75 105 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01291 Phco-Chr4 11078696 11080974 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco4g01291 PK_Tyr_Ser-Thr 2.1e-47 CL0016