Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01277 ATGATGTTACACTTTCAAGCAAAATGCATTAAACACATGGAAGCTTTTACTCAAAGGTGTATATCTAGATGGTCTATTACACTTTATGCTCGTTACTCCGATACTTCTCAGAAGAAGTCTAAGCTTGCTCCTTTGCAGGAGAGACGTATGATAGACCAGTGTAAGATATTTGCAAAAGCAGGTGATGGAGGTAATGGTTGCTCCAGCTTGCGCAAGGGAAGACCTGATGGTGGCAATGGGGGGAGAGGCGGTGATGTGATTCTGGAATGCTCTCCCAGAGTTTGGGACTTCAGTGGTTTGCAGCGTCATCTGATAGCCGAGAAAGGAGGACATGGATCATCAAAAAATTTAATAGGTAGCAGGGGTGCTGATAAGGTTGCTCGTGTACCGATTGGCACTGTACTTCATCTTGTCAATGGTGATATTCCTTCCGTTGTCAAAACTCAATCCTTGACTGATGTAGACCCTTGGGATATTCCAGGGGCACTTGTTGATGATCTTCCTGACCCTGGCCATGGTTCTACTTCCAGTGTTGCAAGAGTGGAAGTAAAAGCAACACATTCTACTGACTTCTCCTCAACACAAGCTGAAGAAACAAATGCTAAGAAATCTGAAAAATCAAGACAAGTTGCATCAACAGATGCATTCTCTCAACTCTCCACTTCTAATGGAGCTCCTGAATTTTGTACTGAGGATATAGAAGAGAACCAAGAGATAATATACAATGTTGCTGAATTAACAGAAGAAGGTCAACAAGTTGTCATTGCTCGTGGAGGAGAAGGTGGTCTGGGCAATGTGTCTAGTTCCAAAGATTCAATGAAAAATGTGACTATGAAGGCAGGGGCTTGTCAACTCATACCTAATCTTCAGGATCCTAACGGTATCCACTCCTCTCTGCACGCAGGTTCACCTGGTTTTGAGACCGTTCTTATATTAGAACTCAAGAGTATTGCTGATGTAAGCTTTGTGGGCATGCCTAATGCTGGTAAAAGCACCTTACTTGGGGCTATATCAAAGGCCAAGCCTGCTGTTGGTGACTATGCGTTTACTACTCTCAGGCCAAATTTGGGGAATCTAAACTATGATGATCTTTCAATAACCGTGGCTGATATTCCTGGGCTTATAAAAGGTGCACACCAAAATCGTGGACTCGGGCATGCATTTCTGCGCCACATAGAGCGCACAAAGGTTCTTGCTTATGTGGTAGACTTGGCTGCTGCTTTGAATGGAAGGAAGGGAATTCCGCCATGGGAACAGCTCAGAGACTTAATTCTAGAGCTAGAGTACCATCAGGATGGTTTGTCCAATCGGCCATCCTTGATAGTTGCAAATAAGATTGATGAGAACGGTGCAGATGAAGTATATAAAGAGTTAAAGAGAAGGGTACAAGGTGTTCCCATCTTTCCTGTATGTGCTGTTTTGGGGGAAGGCATAGCTGATCTTAAAGCTGGCCTGAAAATGCTTGTCAATGCTGAAACGTCGTATAAACTTTGCCTAGATAAAATTTTGCTTGCTTAG 1518 0.4341 MMLHFQAKCIKHMEAFTQRCISRWSITLYARYSDTSQKKSKLAPLQERRMIDQCKIFAKAGDGGNGCSSLRKGRPDGGNGGRGGDVILECSPRVWDFSGLQRHLIAEKGGHGSSKNLIGSRGADKVARVPIGTVLHLVNGDIPSVVKTQSLTDVDPWDIPGALVDDLPDPGHGSTSSVARVEVKATHSTDFSSTQAEETNAKKSEKSRQVASTDAFSQLSTSNGAPEFCTEDIEENQEIIYNVAELTEEGQQVVIARGGEGGLGNVSSSKDSMKNVTMKAGACQLIPNLQDPNGIHSSLHAGSPGFETVLILELKSIADVSFVGMPNAGKSTLLGAISKAKPAVGDYAFTTLRPNLGNLNYDDLSITVADIPGLIKGAHQNRGLGHAFLRHIERTKVLAYVVDLAAALNGRKGIPPWEQLRDLILELEYHQDGLSNRPSLIVANKIDENGADEVYKELKRRVQGVPIFPVCAVLGEGIADLKAGLKMLVNAETSYKLCLDKILLA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01277 505 Pfam GTP1/OBG 51 136 IPR006169 -
Phco4g01277 505 Gene3D GTP1/OBG domain 50 316 IPR036726 -
Phco4g01277 505 SUPERFAMILY Obg GTP-binding protein N-terminal domain 50 275 IPR036726 -
Phco4g01277 505 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 318 490 IPR031167 GO:0005525
Phco4g01277 505 MobiDBLite consensus disorder prediction 210 226 - -
Phco4g01277 505 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 319 488 IPR027417 -
Phco4g01277 505 PRINTS GTP1/OBG GTP-binding protein family signature 341 359 IPR006073 GO:0005525
Phco4g01277 505 PRINTS GTP1/OBG GTP-binding protein family signature 320 340 IPR006073 GO:0005525
Phco4g01277 505 PRINTS GTP1/OBG GTP-binding protein family signature 368 383 IPR006073 GO:0005525
Phco4g01277 505 PRINTS GTP1/OBG GTP-binding protein family signature 385 403 IPR006073 GO:0005525
Phco4g01277 505 Coils Coil 499 505 - -
Phco4g01277 505 Gene3D - 317 497 IPR027417 -
Phco4g01277 505 NCBIfam small GTP-binding protein domain 318 480 IPR005225 GO:0005525
Phco4g01277 505 MobiDBLite consensus disorder prediction 183 198 - -
Phco4g01277 505 Pfam 50S ribosome-binding GTPase 320 445 IPR006073 GO:0005525
Phco4g01277 505 ProSiteProfiles Obg domain profile. 48 317 IPR006169 -
Phco4g01277 505 MobiDBLite consensus disorder prediction 183 226 - -
Phco4g01277 505 CDD Obg 318 489 IPR031167 GO:0005525
Phco4g01277 505 PIRSF GTP-binding_obg 47 500 IPR014100 GO:0000287|GO:0003924|GO:0005525
Phco4g01277 505 PANTHER DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED 36 486 IPR045086 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01277 Phco-Chr4 10812135 10814220 Dispersed