Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01206 ATGGCACGTTCCTTATGCCCATCCCTTCCGAACAATTCCACCTTCTCTGGTTTCTGCAAACTATACTCTTCCTCACAGCATTTATGTTTCCACCCACCAAAATCAAGCCCGCAATTTAAGACTCGTTGGGGCCCAGAAGCTCTGCCCCTTGGTAACCGAAAGAAGGGAAGTTCAAGCAAACTTACTGCGTCGAGCGAAGGAGCGAATGGTTATGGGAGTGTAGACGCAGAGGGTTATCATGGGTCGGTGGAAGATAAGCAATTCGTGCGATCCTTTCGCGAGGCCTGGCCTTACTTGTGGGCCTATCGTGGCAGCACCTTCGTTGTCATTATTTCTGGAGAAATTGTTTCTAGTCCTTTCCTAGATCCTATTCTCAAGGATATAGCTTTCCTTCATCACCTAGGAATCCGGTTTGTTCTTGTTCCGGGGACACATGTGCAGATAGACAAGCTTCTGAATGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGAAGAATCTCTAGAAGCTGCGATGGAAGCCGCTGGGGGAATACGATTGATGATCGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGTGACAATAGTCGATGGCATGAAGTTGGCGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAAAGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACCTATGAAGTCGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAGTTGATATGCCTTATAGATGGTCCAATACTTGATGAGAATGGACGCTTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGCTAATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTCAAAGTTGTTGATGAAGAAGGTTTCAACTCTCTTGAATATAACAATTTTAATGGAATAGTCAAATCACCACCTATTGGGCGTTTTACAGAATGGCATAATGCAACCTTCCATAATGGTGTTGGTTTTGAAATTGGAAATGGCTTAGAATCTAGTGAGCAAGGTTTCGCTATTGGAGGTCAAGAGCGGTTAAGTCGAATGCATGGTTACCTGTCAGAGTTGGCTGCTGCCGCTTTTGTTTGCAGAGGTGGCGTTCAAAGAGTTCACTTGCTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGACGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGCACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGCGGACTGATAATGAGCTCTTGCAAACATTGGATTCATTCGTTATTGTGGAAAGAGAAGGTCACATAATTGCTTGTGCTGCCCTTTTTCCTCACTTTGAGGAGAAGTGCGGAGAGGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGTGACAAATTGCTTGATTATATGGAGAAGAAAGCATCGCATCTTGGATTGAATATGCTTTTCCTGCTAACAACACGTACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGTTCAATTGATTACATTCCAGAAAAGAAAAGGAGAATGATCAATCTTTCTCGCAATTCTAAGTATTATATGAAGAAACTTCTACCAAATAAAAGTGGAATTACTGTTGGTGTAAAATCTGCTTCAAGTTAG 1848 0.4351 MARSLCPSLPNNSTFSGFCKLYSSSQHLCFHPPKSSPQFKTRWGPEALPLGNRKKGSSSKLTASSEGANGYGSVDAEGYHGSVEDKQFVRSFREAWPYLWAYRGSTFVVIISGEIVSSPFLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDEESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHEVGVSVASGNFLAAKRRGVVKGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICLIDGPILDENGRLIRFLPLQEADMLIRKRAEQSEAAANYVKVVDEEGFNSLEYNNFNGIVKSPPIGRFTEWHNATFHNGVGFEIGNGLESSEQGFAIGGQERLSRMHGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDNELLQTLDSFVIVEREGHIIACAALFPHFEEKCGEVACIAVSPDCRGQGQGDKLLDYMEKKASHLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYYMKKLLPNKSGITVGVKSASS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01206 615 PANTHER AMINO-ACID ACETYLTRANSFERASE 60 607 IPR010167 GO:0004042|GO:0005737|GO:0006526
Phco4g01206 615 Gene3D - 86 452 IPR036393 -
Phco4g01206 615 NCBIfam amino-acid N-acetyltransferase 408 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Phco4g01206 615 Pfam Acetyltransferase (GNAT) family 492 558 IPR000182 GO:0016747
Phco4g01206 615 CDD AAK_NAGS-ABP 87 447 IPR033719 -
Phco4g01206 615 CDD NAT_SF 494 556 - -
Phco4g01206 615 MobiDBLite consensus disorder prediction 47 68 - -
Phco4g01206 615 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 456 602 IPR016181 -
Phco4g01206 615 SUPERFAMILY Carbamate kinase-like 401 449 IPR036393 -
Phco4g01206 615 Hamap Amino-acid acetyltransferase [argA]. 87 599 IPR010167 GO:0004042|GO:0005737|GO:0006526
Phco4g01206 615 Gene3D - 453 599 - -
Phco4g01206 615 Pfam Amino acid kinase family 107 329 IPR001048 -
Phco4g01206 615 SUPERFAMILY Carbamate kinase-like 86 322 IPR036393 -
Phco4g01206 615 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 453 601 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01206 Phco-Chr4 10063433 10070565 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco4g01206 AA_kinase 9.9e-13 No_clan