Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01186 ATGGGTGAAGAGTTAAAAGCTGTGGTGGTTGTTAGAGAGTTTGATCCCAATAGAGATAGAGAAAGAGTAGAAGCCGTTGAAAGGATATGTGAAGTTGGACCCAGTGGCAAGCTTTCTCTCTTCACCGACATGCTGGGTGATCCTATTTGCAGGGTCCGCCATTCACCTGCTTTTCTCATGCTGGTAGCAGAGATTGGCGAAGAGGTAGTAGGAATGATAAGAGGATGCATAAAAACGGTGACATGCGGAAAAAGACGCTCCAGGAACGGAAAACACAATGCCAATAATGCTAAACATGTTCCAGTGTATACTAAAGTGGCTTACATACTAGGCCTTCGCGTTTCACCTAATCAACGGAGAATGGGAATAGGGTTGAAGCTGGTACATAGGATAGAGGAGTGGTTCAGGGATAATGGAGCCGAGTATTCCTACATGGCAACGGAAAACGACAATTTAGCGTCCGTTAAACTCTTCACCGACAAATGCGGGTATTCAAAGTTCCGTACCCCGTCCATGCTTGTCAACCCCGTTTTCGCCCACCGAGCCAGAGTGTCCCCAAAGGTCACAATCATTAGCCTTTCCCCTTCTGACGCAGAGGTTATCTACCGTCGCCGTTTTGCCACGATGGAGTTCTTCCCGCGCGACATTGACTCCGTTCTGAAGAACAAGCTCAGTCTGGGGACGTTTCTGGCGGTTCCGGGCGGGTCCTACAGGGCTGAGACATGGCCCGGGCCAGATCTTTTCCTGTCGGACCCACCGAAGTCGTGGGCCTTGGTGAGCGTGTGGAACTCAAAGGAGGTGTTCACGCTCGAGGTGAGAGGCGCGTCGCGCGTGAAACGCACTCTCGCGAAGACGACGCGGGTTGTGGACCGGGCTCTGCCGTGGCTGCGTGTACCGTCGATCCCGGATTTGTTCAGGCCGTTTGGGTTTCACTTCATGTACGGGCTTGGAGGGGAAGGCCCAGATGCAGTGAAGATGGTGAAGGCCCTATGTGGGTTCGCGCACAACCTCGCGATGGAAAAAGGTTGCAGAGTGGTGGCCACGGAAGTGTCACCAAACGAGCCCTTAAGGTTCGGTATACCCCACTGGAAGATGCTGTCGTGTGACGAAGATTTATGGTGTATGAAGCGGTTGGGTGAGGATTACAGCGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGAATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1221 0.5225 MGEELKAVVVVREFDPNRDRERVEAVERICEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGEEVVGMIRGCIKTVTCGKRRSRNGKHNANNAKHVPVYTKVAYILGLRVSPNQRRMGIGLKLVHRIEEWFRDNGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSMLVNPVFAHRARVSPKVTIISLSPSDAEVIYRRRFATMEFFPRDIDSVLKNKLSLGTFLAVPGGSYRAETWPGPDLFLSDPPKSWALVSVWNSKEVFTLEVRGASRVKRTLAKTTRVVDRALPWLRVPSIPDLFRPFGFHFMYGLGGEGPDAVKMVKALCGFAHNLAMEKGCRVVATEVSPNEPLRFGIPHWKMLSCDEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01186 406 CDD NAT_SF 60 142 - -
Phco4g01186 406 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 6 406 - -
Phco4g01186 406 Pfam Acetyltransferase (GNAT) family 54 164 IPR000182 GO:0016747
Phco4g01186 406 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016747
Phco4g01186 406 FunFam Probable N-acetyltransferase HLS1-like 18 171 - -
Phco4g01186 406 Gene3D - 40 170 - -
Phco4g01186 406 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 166 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01186 Phco-Chr4 9888708 9890178 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Phco4g01186 Acetyltransf_1 9.1e-18 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01186 4 9888708 9890178 Phco4g01186 4 9888708 9890178 ECH
Phco4g01186 4 9888708 9890178 Phco8g00966 8 10015016 10017590 PCT