Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01183 ATGAGTTGCAACGGGTGCCGCGTCCTTCGAAAGGGTTGCAGCGACTCTTGTATCCTGCGGCCGTGTCTACAGTGGATCGATACTCCCGAGGCCCAAGGTCACGCCACAGTTTTTGTTGCCAAATTCTTCGGTCGTGCCGACCTCATGTCCTTCATTTCCAACGTCCCGGAGGCCCAAAGGCCCGCTCTGTTTCAGTCTCTGCTGTTTGAAGCTTGTGGACGAACGGTGAATCCAGTCAACGGCGCTGTCGGCCTTTTATGGACTGGAAACTGGCACGTCTGCCAGGCGGCAGTTGAGACAGTGCTCCGTGGCGGTACCGTCAGGCCTGTGCCAGAGCTTCTTGGCCTAGGCGCTCCCACTCCCGACGACGCCTCCGAAGGCGAAGTTACCTGTAACGACAAATGGAGGGTCCGAGATCCGAACCCGATTTTCCGGTTGCCGGGTTCGATGTCCGATAAGGCTGCTTCTGGTGGTAAACGCAAGCGATTGGAAGAGCTTGCAAAGCTGCAGACGGCCACCACTGATCTCAATCTCCGGTTGACACCGAGTTTCCTGCAGAACTCGGCGAACTTCGGTTGCCGGCAGGAAATTCGATGGCCGAGATCGCCGTCGATAAACTCGGAGGAGTCCGGGACCACGACGGCGGCGTGCTTGGAAAGCGGGATCGGAGATCACTACGCTCCCGACGGAGACCGGAAAGTGTTGAACCTCTTCATTTGA 720 0.5764 MSCNGCRVLRKGCSDSCILRPCLQWIDTPEAQGHATVFVAKFFGRADLMSFISNVPEAQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTVRPVPELLGLGAPTPDDASEGEVTCNDKWRVRDPNPIFRLPGSMSDKAASGGKRKRLEELAKLQTATTDLNLRLTPSFLQNSANFGCRQEIRWPRSPSINSEESGTTTAACLESGIGDHYAPDGDRKVLNLFI 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01183 239 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 209 - -
Phco4g01183 239 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Phco4g01183 239 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01183 Phco-Chr4 9823016 9823814 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco4g01183 LOB 4.2e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01183 4 9823016 9823814 Phco8g00970 8 10073957 10074738 ECH
Phco4g01183 4 9823016 9823814 Phco4g01183 4 9823016 9823814 ECH
Phco4g01183 4 9823016 9823814 Phco6g02760 6 49009858 49016451 PCT
Phco8g00970 8 10073957 10074738 Phco4g01183 4 9823016 9823814 PCT