Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01127 ATGGCGTCGAAGCCTTCGCCTTCGCCCTCTTCTTCCAGATCGGAGCTTATCATCGATCCTTCCGGTGAGAAAGTGGACGCTGTTAGTCAGACTGTTAAAGATGTGTTGCCGGTTATTGATTCTTTAAAGAAACAAGTTGCTGTGGAACGGATTGTTTATGTAAAGAATAGAATAGAGGAAAACAGACAGAAGCTGGTTGGTGTCACAAATCATGTCTGCAAAATGGCAATAGAGAGAAGGAACATCAGCATTGCTGAATCTAACAGAAGTCTAGACCTACTTACAAAGAGGCAAAAAGATGCAATTGATATGCACAACGGTGTTCATGCAAGTAATGGTGATGTAGAGAGCAATGGCTATCATGAAGATAGCCATGGTTCTACAGCAGTTCTTCTAGGGTCTAACGTTGCTGTTAAGAATGCTGTTCGTCCAATCAAATTGCCTGAAATAAAAAATTTGCCTCCTTATACTACGTGGATATTTCTGGATAGAAATCAAAGAATGACTGAGGATCAGTCAGTTGTAGGCCGAAGACGAATTTATTATGATCAAAATGGTGGAGAAGCACTTATATGCAGTGACAGTGAGGAGGAAATTATGGAGGATGAAGAGGAGAAAAGAGAATTTATAGAATCAGAAGATTATATACTTCGTATGACTGTCAAAGAATTTGGTTTAACTGACATCGTTATGGAGTCATTGGCTCAGTGCTTTTCTAGGAACACTAATGAAATTAAGGCAAGGTATGAAGCTCTTAGCATTCATCAAGACAATGCTGATGGGTCTTCCAAGGCTGTAGATTCTGGAGAGAATTCTCAGATTGGCAATTCTTTTCTGGAAAAGGATCTTGAAGCTGCTCTTGACTCTTTTGACAACCTCTTTTGTCGACGATGTCTTGTTTTTGATTGTAGATTACATGGATGTTCACAGGATCTTGTCTTCCCTGCTGAGAAGCAACCTATATGGATCCCTCCTGATAGTGAAAATGCACCCTGTGGGCCAAATTGTTTCCGATCGGTGCTTAAGTCAGAAAGATTTGCCAGAACATCTTCTGCCCAGGCTGATGGTGAAGATAAGTGCTCTGGTGGCGTTTTATCTAGGAAAAAGTCTTCTACTAAAAGGCGGGTAAAAGGAAGCCAAAGTGAAAGTGCTTCATCAAATGCAAAGAACATATCTGAGAGTAGTGACTCAGAGAATGGTCCTGGACGAGATGCTTTTTCAGCATCTCACTCAGCTCCTCCTAAAACTAAATCTGTGGGGAAAGCTGGAATTGGTAAGAGGAACAGTAAGCGAGTGGCAGAACGAGTCTTAGTATGCATGCAGAAAAGGCAGAAGAAAACAATGGTTTCTGATTCTGATTCCATTAGTGAAGCTCTTGAGCGTTCATCAAATGATATGGTCACTGATCAACATGCTATGAGCAGTGAAGACAAGACAAGGAAAGAAGATTTTGTAGATGACAACGTTTGTAAACAAGAAATCATAGACAATAAATCTTGGAAAGCTCTTGAAAAGGGGCTTTTAGAGAAAGGAATGGAGATTTTTGGTAGAAACAGTTGCTTAATAGCTAGGAATCTATTAAATGGTCTAAAGACTTGTTGGGATGTTTTCCAATACATAAATTGTGAAGAAGGAAAGATGTCTGGTCCTCCTGGGGATGTTGCAAATTCCCTTTTGGAAGGCTATTCCAAGGGTAATAATGAAGTGAGAAGAAGGTCTAGGTTTTTACGCAGAAGAGGAAGAGTCCGTCGATTGAAGTACACCTGGAAATCTGCTGCTTATCATTCTATCAGGAAAAGGATTACAGAGAGAAAGGATCAACCCTGTCGGCAGTATAATCCATGTGGTTGCCAATCTGCTTGTGGAAAGCAGTGCCCCTGTCTTCTTAATGGAACCTGTTGTGAGAAGTACTGTGGATGTCCCAAGAGCTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCCGCAGACAGGGAATGTGATCCAGATGTCTGTAGGAATTGTTGGGTCAGTTGTGGCGATGGTTCTCTTGGGATTCCTAGCCAAAGAGGGGACAATTATGAATGTAGAAACATGAAGCTTCTTCTCAAACAGCAGCAAAGGGTTCTTCTTGGAAGGTCTGATGTATCAGGCTGGGGAGCCTTCTTAAAGAATAGTGTTGGTAAACATGAATACCTTGGAGAATATACAGGAGAGTTAATTTCTCATCGGGAAGCAGACAAGCGAGGAAAGATATATGACCGTGAAAATTCATCTTTTCTGTTTAATTTGAATGATCAGTTCGTTCTTGATGCTTACCGAAAGGGTGATAAATTGAAGTTTGCAAACCATTCGCCCGATCCAAATTGCTATGCAAAGGTTATTATGGTTGCTGGAGATCACAGGGTAGGCATTTTTGCGAAGGAACGGATTTGCGCCGGGGAGGAGCTGTTCTATGATTATCGTTATGAGCCCGATAGGGCCCCTGCCTGGGCTCGGAAGCCTGAAGCATCTGGATCCAAAAAAGAGGACGGGGCTCCTTCAAGTGGTCGTGCGAAGAAGCTTGCTTAA 2586 0.4203 MASKPSPSPSSSRSELIIDPSGEKVDAVSQTVKDVLPVIDSLKKQVAVERIVYVKNRIEENRQKLVGVTNHVCKMAIERRNISIAESNRSLDLLTKRQKDAIDMHNGVHASNGDVESNGYHEDSHGSTAVLLGSNVAVKNAVRPIKLPEIKNLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEIMEDEEEKREFIESEDYILRMTVKEFGLTDIVMESLAQCFSRNTNEIKARYEALSIHQDNADGSSKAVDSGENSQIGNSFLEKDLEAALDSFDNLFCRRCLVFDCRLHGCSQDLVFPAEKQPIWIPPDSENAPCGPNCFRSVLKSERFARTSSAQADGEDKCSGGVLSRKKSSTKRRVKGSQSESASSNAKNISESSDSENGPGRDAFSASHSAPPKTKSVGKAGIGKRNSKRVAERVLVCMQKRQKKTMVSDSDSISEALERSSNDMVTDQHAMSSEDKTRKEDFVDDNVCKQEIIDNKSWKALEKGLLEKGMEIFGRNSCLIARNLLNGLKTCWDVFQYINCEEGKMSGPPGDVANSLLEGYSKGNNEVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITERKDQPCRQYNPCGCQSACGKQCPCLLNGTCCEKYCGCPKSCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGSLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHREADKRGKIYDRENSSFLFNLNDQFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERICAGEELFYDYRYEPDRAPAWARKPEASGSKKEDGAPSSGRAKKLA 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01127 861 ProSiteProfiles CXC domain profile. 598 697 IPR026489 -
Phco4g01127 861 MobiDBLite consensus disorder prediction 1 20 - -
Phco4g01127 861 MobiDBLite consensus disorder prediction 1 17 - -
Phco4g01127 861 ProSiteProfiles SET domain profile. 712 827 IPR001214 GO:0005515
Phco4g01127 861 CDD SET_EZH 712 828 - -
Phco4g01127 861 SMART set_7 712 833 IPR001214 GO:0005515
Phco4g01127 861 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 861 IPR025778 GO:0031519
Phco4g01127 861 Pfam SET domain 723 826 IPR001214 GO:0005515
Phco4g01127 861 MobiDBLite consensus disorder prediction 377 404 - -
Phco4g01127 861 Pfam CXC domain 650 681 IPR041355 -
Phco4g01127 861 MobiDBLite consensus disorder prediction 351 428 - -
Phco4g01127 861 SUPERFAMILY SET domain 586 832 IPR046341 -
Phco4g01127 861 MobiDBLite consensus disorder prediction 835 861 - -
Phco4g01127 861 SMART CXC_2 646 683 IPR033467 -
Phco4g01127 861 FunFam Putative histone-lysine N-methyltransferase EZH2 612 829 - -
Phco4g01127 861 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 30 859 IPR045318 GO:0006338|GO:0042054
Phco4g01127 861 Gene3D SET domain 612 829 IPR046341 -
Phco4g01127 861 MobiDBLite consensus disorder prediction 461 480 - -
Phco4g01127 861 MobiDBLite consensus disorder prediction 835 854 - -
Phco4g01127 861 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01127 Phco-Chr4 9163962 9173906 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco4g01127 SET 8.4e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01127 4 9163962 9173906 Phco4g01127 4 9163962 9173906 ECH