Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01119 ATGAACTGGGTTCGTGGAGACTCACTCGGCCGTGGAACCTTCGCCACCGTCAACATCGTCGTGCCTGCAAACGGATCCACTTTTTTCCCTTCTCCCGCCGCCGTCAAATCCTCTGTTTCCGACAACGCGGGTTTGCTAAAAAACGAAATGGAGATACTCAGTCGCGTTGGCTCTTCCCCTCACATCATCAACTGTTTCGGTCACGATCACACCGTCGAGAACGGCGAGGAGTTCTACAACGTCTTCCTCGAACTGGCCGCCGGAGGTTCTCTCGCCGATCAAGTCAAGAAACACGGCGGAAGCCTCCCGGAGCCTTTCGTGCGGCGATGCACAAGGTCCATCGTGGAAGGGCTCAGACATATTCACGATCATGGTTTTGTTCACTGCGACGTGAAGCTTCAAAACGTTCTCGTTTTCGACAACGGCGAGGTGAAAATAGCAGACTTCGGGCTCGCCAAGGAGAAGGGGGAGAAACAGGGGAAGTACGAGTGCAGGGGAACGCCGTTGTTTATATCACCAGAATCGGTGAACGACAATGAGTATGAGCCGCCGGCGGATATTTGGGCCCTGGGATGCGCCGTCGTGGAGATGGTGACCGGAAAACCCGCTTGGGATATTCGCGACGGATCGAGTATTTGGTCATTGTTGATTCGGATTGGAGTGGGAGAAGAATTGCCAAAGATTCCAGAAGATTTGTCGGAAGAGGGGAAGGACTTTTTGGGAAAGTGCTTTGTTAAGGATCCCACGAAGAGGTGGAGCGCTGAGATGCTTCTCAAACACCCTTTCATCAAAGTTGACTCAATTTCGTTTGATAAAGTTAATGAGCCGTTATCGCCGCCGTCACCCAGTACCCACTTTGATTTTCCTCACTGGGCTTCCACCGTAACGGCTTCGCTCCCGTCTTCCCCGTATTCCGACGAGTGGTCTGGGTGGTCGTGTTCGCCGGAGAGTCGTCTCCGGCGGCTTGTTACCGATAAGAGACCGGAGAATTGGTCAGAATTAGATGGCTGGATGAGCGTTAGTGCCCTTGAGCTTTTTCTGATTAAACGGAAGATAAAGGGGCCTTCAGTGGTTGTTGCAGCAAGAAACTTGAAAACCACCATAAATGAAAAGCAGAACATTATGAGATTGTATCAGCATCCAATGTCTGTTATTGATACCCCTATGATGGCTTCAGAGTGGAGGAGACCCGCAAGGCTGACCCATTTTACTGCTGTTTGTCAACAAGGAGTATTGATGACTGAATTAGAGGCAATCAAGATTGGAATTGAAATAGCAATTTCCAGGGGATACAAGAACTCGATGGTTGAAAGTGACTCTAAAGTTGCCATTGATATTATTACTAGCCTTGTAGGCCAACCAAACAATGACGATAGAAGTCAAAGTCAACATGTTATCCCTTCAATCATTGAGATAACTAAGATGGTTAACAAAATTCATTGGAATCAAGTGTTCAGGGAGGTAAACTCAGCAGCTGATGGTCTCACCAAACATGAGTTGTCATTGTGTCCGATTTAG 1518 0.4881 MNWVRGDSLGRGTFATVNIVVPANGSTFFPSPAAVKSSVSDNAGLLKNEMEILSRVGSSPHIINCFGHDHTVENGEEFYNVFLELAAGGSLADQVKKHGGSLPEPFVRRCTRSIVEGLRHIHDHGFVHCDVKLQNVLVFDNGEVKIADFGLAKEKGEKQGKYECRGTPLFISPESVNDNEYEPPADIWALGCAVVEMVTGKPAWDIRDGSSIWSLLIRIGVGEELPKIPEDLSEEGKDFLGKCFVKDPTKRWSAEMLLKHPFIKVDSISFDKVNEPLSPPSPSTHFDFPHWASTVTASLPSSPYSDEWSGWSCSPESRLRRLVTDKRPENWSELDGWMSVSALELFLIKRKIKGPSVVVAARNLKTTINEKQNIMRLYQHPMSVIDTPMMASEWRRPARLTHFTAVCQQGVLMTELEAIKIGIEIAISRGYKNSMVESDSKVAIDIITSLVGQPNNDDRSQSQHVIPSIIEITKMVNKIHWNQVFREVNSAADGLTKHELSLCPI 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01119 505 ProSiteProfiles Protein kinase domain profile. 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01119 505 Pfam Protein kinase domain 5 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01119 505 CDD STKc_MAPKKK 2 263 - -
Phco4g01119 505 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Phco4g01119 505 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 312 - -
Phco4g01119 505 Gene3D - 397 502 IPR036397 GO:0003676
Phco4g01119 505 Gene3D Transferase(Phosphotransferase) domain 1 93 282 - -
Phco4g01119 505 SMART serkin_6 3 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01119 505 SUPERFAMILY Ribonuclease H-like 409 500 IPR012337 -
Phco4g01119 505 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Phco4g01119 505 CDD RNase_H_like 412 497 IPR044730 -
Phco4g01119 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Phco4g01119 505 Pfam Reverse transcriptase-like 410 498 IPR002156 GO:0003676|GO:0004523
Phco4g01119 505 SUPERFAMILY Protein kinase-like (PK-like) 3 306 IPR011009 -
Phco4g01119 505 FunFam Mitogen-activated protein kinase kinase kinase 17 2 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01119 Phco-Chr4 9071969 9080456 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco4g01119 Pkinase 3.8e-52 CL0016