Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01084 ATGGGTCTCTGCACTTCCAAACCCACTCTCTCCTCTCCCCAATCCGCCACTCACTCCCCCGTGCTACCTTCTCAAAACGTGGCTGTCGCAATCACTGACAGTCACAGCGCCGAACCTCACGTGCGCAGCACCAATGGCGAGAGCGAAAACCCTAAGGAGCTGGAGAACGGTAAGAGATCTCCTTTCTTCCCATTCTACAGTCCGAGTCCGGGCCGCTACGTGTTTCCCGTCTCGCCGCGCCGCTTCTTCAAGCGATCGTTTCTGTCGCCCTCGCCGGCGAAGCACATAAGGGCGGCGCTGGCGAGGCGGCACGGGTCGGTGAAACCCAACGAGGCTGCCATACCGGAGGCTGAGCCAGTCGCGGGGCTCGACAAGAGCTTCGGATTCTCCAAACATTTGGGAAATAAGTATGAAGTTGGAGATGAAGTTGGGAGAGGGCACTTTGGATACACTTCTGTTGCTAAGGTGAAAAAAGGAGAGCTGAAGGGACAACAAGTGGCCGTTAAAGTCATTCCAAAAGCCAAGATGACCACTGCAATTGCTATTGAAGATGTGAGAAGGGAGGTAAAAATATTGAGAGCTTTGACTGGGCACAAGAATCTAGTACAATTCTATGATGCATATGAAGACCATAATAATGTCTATATTGTAATGGAGTTGTGTGAAGGAGGAGAGCTGTTAGACAGAATATTGTCAAGAGGTGGGAAGTACACAGAGGAAGAAGCAAAAGTGGTCCTGAGACAAATACTGAATGTTGTTGCCTTTTGCCATCTTCAGGGTGTCGTGCATCGTGATCTTAAACCTGAGAACTTCTTGTTCACATCCAGGGACGAGAACTCAAACTTGAAGGCCATAGACTTTGGGTTGTCAGATTTTGTTAAACCGGATGAAAGACTCAATGATATTGTTGGCAGTGCATATTATGTGGCTCCTGAAGTTCTACATAGAGCTTACAGTACAGAAGCTGATGTCTGGAGTATTGGAGTGATTGCATATATTTTATTATGTGGCAGTCGTCCCTTTTGGGCCCGGACTGAGTCTGGTATCTTCCATGCGGTATTAAAAGCTGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTCTGACAGATGAGGCAACAAATTTTGTTATGCGATTACTAAATAAAGATCCACGGAAAAGAATGTCTGCAGCACAGGCGTTAAGTCATCCATGGATTAAAAACAAGGATGTGAAAGTACCTCTGGATATTCTAATATTCAAGCTCATGAAGGCATACATGCGTTCCTCATCTTTACGGAAAACGGCTTTAAGGGCTCTGTCCAAGACGTTAACTGTGGACGAGTTATTTTATTTGAGGGAGCAGTTTGCACTTTTAGAGCCAAGCAAAAATGGCTCCATTAGCTTGGAAAATATCAAAGCGGTCTTGATGGTGAATGCAACAGATGCTATGAACGAGTCACGTGTACCTGACTTTCTGACATCACTTAATGCATTACAATTTAGAAGGATGGATTTTGATGAGTTCTGTGCGGCTGCCCTTAGTGTCCATCAACTTGAAACACATGACCAGTGGGAGCAACGTGCACGTTATGCTTACGAACTTTTTGAGAAGGACGGAAACAAGGCCATAGTCATTGACGAACTAGCATCGGAGCTTGGGCTTGGTCCATCTGTCCCTGTTCATGCTGTTCTCCATGATTGGATTCGGCACACTGATGGAAAATTAAGTTTCCTTGGGTTTGTCAAACTGTTGCATGGCCCATCTAGAAGTCTTGCAAAAGCTCAATAG 1770 0.4627 MGLCTSKPTLSSPQSATHSPVLPSQNVAVAITDSHSAEPHVRSTNGESENPKELENGKRSPFFPFYSPSPGRYVFPVSPRRFFKRSFLSPSPAKHIRAALARRHGSVKPNEAAIPEAEPVAGLDKSFGFSKHLGNKYEVGDEVGRGHFGYTSVAKVKKGELKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLVQFYDAYEDHNNVYIVMELCEGGELLDRILSRGGKYTEEEAKVVLRQILNVVAFCHLQGVVHRDLKPENFLFTSRDENSNLKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFHAVLKADPSFDEPPWPSLTDEATNFVMRLLNKDPRKRMSAAQALSHPWIKNKDVKVPLDILIFKLMKAYMRSSSLRKTALRALSKTLTVDELFYLREQFALLEPSKNGSISLENIKAVLMVNATDAMNESRVPDFLTSLNALQFRRMDFDEFCAAALSVHQLETHDQWEQRARYAYELFEKDGNKAIVIDELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLAKAQ 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01084 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 122 564 - -
Phco4g01084 589 SMART serkin_6 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01084 589 CDD STKc_CAMK 136 398 - -
Phco4g01084 589 MobiDBLite consensus disorder prediction 1 61 - -
Phco4g01084 589 FunFam CDPK-related kinase 3 129 301 - -
Phco4g01084 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 261 273 IPR008271 GO:0004672|GO:0006468
Phco4g01084 589 FunFam Calcium-dependent protein kinase SK5 309 404 - -
Phco4g01084 589 ProSiteProfiles Protein kinase domain profile. 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01084 589 MobiDBLite consensus disorder prediction 1 39 - -
Phco4g01084 589 ProSitePatterns Protein kinases ATP-binding region signature. 143 169 IPR017441 GO:0005524
Phco4g01084 589 SUPERFAMILY EF-hand 426 580 IPR011992 -
Phco4g01084 589 FunFam CDPK-related kinase 1 434 507 - -
Phco4g01084 589 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Phco4g01084 589 Gene3D Transferase(Phosphotransferase) domain 1 226 420 - -
Phco4g01084 589 Gene3D - 421 580 - -
Phco4g01084 589 FunFam CDPK-related kinase 1 130 225 - -
Phco4g01084 589 Pfam Protein kinase domain 137 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01084 589 SUPERFAMILY Protein kinase-like (PK-like) 134 431 IPR011009 -
Phco4g01084 589 MobiDBLite consensus disorder prediction 40 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01084 Phco-Chr4 8737749 8742471 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco4g01084 Pkinase 3.8e-70 CL0016