Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01081 ATGCGCTGGTTCCCCACCCTCCTCTTCTCTCATTCTAATTCATCCTCTTCACCATCACCGTCACCATCGTCGTCGTCAACGCCAACGTCTTCTTTGGCCACTCTCAAATCTTCCTCTTCCACGTCATCATCCGTGTCCCACACCGGGAGGAACACCCGCTCCGCCTGGTTCTTCGGCGGCACCAGAAAGTCGACGCGCTCCAGGAAGCTGAGCCATGTGGCGGACATAGACGCCGTCGTCATCACCCCCTTGTCTCGCTCCACCAGCACCTTCGATCGTTCCTCTACCCCCTCCGCTGAACCTCAGCCGTTACCCTTGCCCAGAGCCATCGACTCCCGTTTACCCTCTCCCAAAGATGCCGCCGACAAACCCAACGCCGTCGTCGATTTTACCCTCCCCGCTGGTTTTCAAATGCGCAGCGTATTCGCGAGGCAAGAGAATAGAAATAATACGGAGCACGTGGAGACAAGGTCACCAGGGGTGGTGCCTCAGCAAGACACGAGCGGTTGTACAAGTACAAGAGCCCAAGGAGATAACTTCTGGTTGAGTGTCCCTGCAAGAAGTGCTCCAACGAGTCCTTTTGCCAGTCCCAGAATCATCCCAAACACTACCAAAACCGATGATTTTGTCCCGTACTATTATGTGTCACCCAAGGCCAACCAGTTCTGGTCAGCACCAGAGATGCCAACATCCGACCCTTCAGCTGGGCACCCACCTCCTGCTTTCTTTGATTTATCAGCACTGCGCACTGATACCATCCTTTCTCCCCATCAAAGCCCACGGGGAAAAAGCCCCACCCCACACCCCAAAAGCCCTAATGCCCATTCTTCTTCTTCTTCTCCATCCATACCCCCCAGATTATCCCTTGACATCTCAATGGCACGTCGGGAAATCACTCCTCCTCAATTTGTCCACCCCTTACCCTTGCCTCCTTGGGCTGGGCCTGTGGCTCCCTTACTTTCACCATCTGCTACCTTTTCCCCTCCTGTTGCTAAAACAGAATCCTTGCCAATGAAAAACCAGTGGCAAAAGGGGAAACTTATTGGCCGAGGTACTTTTGGATCTGTTTATGTTGCCACCAATAGAAAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAGTCTTTTCCGATGATCCAAAATCTGCAGAGTGCATAAGGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAACTGAAACATCCAAACATTGTGCAGTATTTTGGTAGCGAAATAGTAGAAGACAGGTTTTATATCTATTTGGAATATGTACATCCTGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACCGAATGTGTTGTTCGGAGTTTCACGCGCCATATTCTTTCGGGGTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAACATCTAACTGGACACGTTGCAGAACTTTCTTTGAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTATGCAAGCAGTTGTGCAAAAAGGGAATAGCACTGAAGTGGCTTTTGCCGTTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACGGGAAAGCCTCCTTGGAGTGAGTACGAAGGAGCCGCAGCTATGTTTAAGGTTATGAGGGATACACCTCCTATACCAGAAACATTGTCAGCTGAAGGTAAAGATTTCTTGAGGCTTTGCTTTATAAGAAATCCAGCCGAGCGACCAAGTGCTTCAATGTTATTAGATCATATATTTCTGAAAAACTTATGA 1821 0.4838 MRWFPTLLFSHSNSSSSPSPSPSSSSTPTSSLATLKSSSSTSSSVSHTGRNTRSAWFFGGTRKSTRSRKLSHVADIDAVVITPLSRSTSTFDRSSTPSAEPQPLPLPRAIDSRLPSPKDAADKPNAVVDFTLPAGFQMRSVFARQENRNNTEHVETRSPGVVPQQDTSGCTSTRAQGDNFWLSVPARSAPTSPFASPRIIPNTTKTDDFVPYYYVSPKANQFWSAPEMPTSDPSAGHPPPAFFDLSALRTDTILSPHQSPRGKSPTPHPKSPNAHSSSSSPSIPPRLSLDISMARREITPPQFVHPLPLPPWAGPVAPLLSPSATFSPPVAKTESLPMKNQWQKGKLIGRGTFGSVYVATNRKTGALCAMKEAEVFSDDPKSAECIRQLEQEIKVLSQLKHPNIVQYFGSEIVEDRFYIYLEYVHPGSMNKYVREHCGAITECVVRSFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVAELSLKGSPYWMAPELMQAVVQKGNSTEVAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMRDTPPIPETLSAEGKDFLRLCFIRNPAERPSASMLLDHIFLKNL 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01081 606 SUPERFAMILY Protein kinase-like (PK-like) 332 605 IPR011009 -
Phco4g01081 606 Pfam Protein kinase domain 343 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01081 606 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 15 605 - -
Phco4g01081 606 MobiDBLite consensus disorder prediction 148 173 - -
Phco4g01081 606 MobiDBLite consensus disorder prediction 86 122 - -
Phco4g01081 606 ProSitePatterns Protein kinases ATP-binding region signature. 348 371 IPR017441 GO:0005524
Phco4g01081 606 ProSiteProfiles Protein kinase domain profile. 342 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01081 606 MobiDBLite consensus disorder prediction 7 55 - -
Phco4g01081 606 FunFam Mitogen-activated protein kinase kinase kinase 5 339 606 - -
Phco4g01081 606 SMART serkin_6 342 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01081 606 MobiDBLite consensus disorder prediction 254 287 - -
Phco4g01081 606 MobiDBLite consensus disorder prediction 154 173 - -
Phco4g01081 606 Gene3D Transferase(Phosphotransferase) domain 1 338 606 - -
Phco4g01081 606 MobiDBLite consensus disorder prediction 269 286 - -
Phco4g01081 606 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01081 Phco-Chr4 8709033 8712562 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Phco4g01081 Pkinase 2.9e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01081 4 8709033 8712562 Phco8g00577 8 5745292 5749654 PCT