Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01034 ATGGCTGTCTTCTTTGTTTCTCTTACTCTTCGTGCTCAGATTCTTTATGTGGTACTCATGTTTTTCACTTGTATTGAAGCTCAATCACAACAGACCAATGGAACAAACTTTTCATGCTCTTCCAATTCACCTCCTTCATGTGAAACCTATGTGACATACATAACCCAGTCTCCAAATTTTTTGAGTCTGACCAGCGTATCTAATATATTTGACACGAGTCCTTTGTCAATTGCCAGAGCCAGCAACTTACAGCATGAGGAAGACAAGTTGATTCCAGGCCAAGTCTTACTGATACCAATAACCTGTGGTTGCACTGGAAACCGCTCTTTCGCCAATATCTCCTATGAGATCAACCAAGGTGATAGCTTCTACTTTGTTGCGACCACTTTATACCAGAATCTCACAAATTGGCATGCAGTGAAGGATTTAAACCCCTCTCTAAGTCCATTTACTTTGCCAATAGGCATCCAAGTTATAATTCCTTTATTCTGCAAATGTCCTTCAAAGAACCAGCTGGACAGAGGGATAAAGTACCTGATCACTCACGTCTGGCAGCCCAATGACAATGTTTCCTTTGTAAGTAACAAGTTCGGTGCATCACCAGAGGACATATTGAGTGAAAACAACTATGGTCAAAACTTCACTGCCGCAAGCAACCTTCCAGTTTTGATCCCAGTTACACTCTTGCCAGATCTTATTCAATCTCCTTCAGATGGAAGAAAACACAGAATTGGTCTTCCAGTTATAATTGGTATCAGCCTGGGATGCACACTACTGGTTGTGGTTTCAGCAATATTACTGGTGTGTGTATGTTGTCTGAAAATGAAGAATTTGAATAGGAGTGCTTCATCAGCTGAAACTGCAGATAAACTACTTTCTGGAGTTTCAGGCTATGTAAGTAAGCCTACCATTTATGAAACTGGTGCAATCTTGGAAGCTACTATGAACCTCAGTGAGCAGTGCAAGATTGGGGAATCAGTGTACAAGGCTAACATAGAGGGTAAGGTTTTAGCAGTAAAAAGATTCAAGGAAGATGTCACGGAAGAGCTGAAAATTCTGCAGAAGGTGAATCATGGAAATCTGGTGAAACTAATGGGTGTCTCATCAGGTAATGATGGAAATTGTTTTGTGGTTTATGAATATGCTGAAAATGGGTCTCTTGAAGAGTGGGTTTTCGCCAAGTCTTCTTCAGAGACATCAAACTCAAGGACCTCCCTTACATGGTGCCAGAGGATAAGCATAGCAGTGGATGTTTCAATGGGTCTGCAGTACATGCATGAACATGCTTATCCAAGAATAATCCACAGGGACATCACAAGCAGTAATATCCTTCTTGACTCTAACTTTAAGGCCAAGATAGCAAATTTCTCCATGGCTAGAACTTTTACCAACCCCATGATGTCAAAAATAGATGTATTTGCTTTTGGGGTGGTTCTGATAGAATTGCTTACTGGCAGGAAAGCCATGACAACCAAAGAAAATGGTGAGGTGGTTATGCTGTGGAAGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGAGGCTCAGAAAATGGATGGATCCTAAGTTAGATAATTATTATCCTATTGATTATGCTCTCAGCTTGGCCTCCTTGGCAGTGAATTGCACTGCAGACAAGTCTTTGTCCAGACCAACCATAGCAGAAATTGTCCTTAGTCTCTCCCTTCTCACTCAACCATCTCCCGCGACACTGGAGAGATCCTTGACTTCTTCTGGATTAGATGTAGAAGCTACTCAAATTGTCACTTCCATCTCAGCTCGTTGA 1794 0.4142 MAVFFVSLTLRAQILYVVLMFFTCIEAQSQQTNGTNFSCSSNSPPSCETYVTYITQSPNFLSLTSVSNIFDTSPLSIARASNLQHEEDKLIPGQVLLIPITCGCTGNRSFANISYEINQGDSFYFVATTLYQNLTNWHAVKDLNPSLSPFTLPIGIQVIIPLFCKCPSKNQLDRGIKYLITHVWQPNDNVSFVSNKFGASPEDILSENNYGQNFTAASNLPVLIPVTLLPDLIQSPSDGRKHRIGLPVIIGISLGCTLLVVVSAILLVCVCCLKMKNLNRSASSAETADKLLSGVSGYVSKPTIYETGAILEATMNLSEQCKIGESVYKANIEGKVLAVKRFKEDVTEELKILQKVNHGNLVKLMGVSSGNDGNCFVVYEYAENGSLEEWVFAKSSSETSNSRTSLTWCQRISIAVDVSMGLQYMHEHAYPRIIHRDITSSNILLDSNFKAKIANFSMARTFTNPMMSKIDVFAFGVVLIELLTGRKAMTTKENGEVVMLWKDIWKIFDQEENREERLRKWMDPKLDNYYPIDYALSLASLAVNCTADKSLSRPTIAEIVLSLSLLTQPSPATLERSLTSSGLDVEATQIVTSISAR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01034 597 ProSiteProfiles Protein kinase domain profile. 285 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g01034 597 ProSitePatterns Tyrosine protein kinases specific active-site signature. 433 445 IPR008266 GO:0004672|GO:0006468
Phco4g01034 597 Gene3D Transferase(Phosphotransferase) domain 1 467 579 - -
Phco4g01034 597 ProSiteProfiles LysM domain profile. 51 98 IPR018392 -
Phco4g01034 597 Gene3D Transferase(Phosphotransferase) domain 1 382 466 - -
Phco4g01034 597 Pfam Protein tyrosine and serine/threonine kinase 341 463 IPR001245 GO:0004672|GO:0006468
Phco4g01034 597 Pfam LysM domain 62 99 IPR018392 -
Phco4g01034 597 SUPERFAMILY Protein kinase-like (PK-like) 313 563 IPR011009 -
Phco4g01034 597 Gene3D Phosphorylase Kinase; domain 1 296 381 - -
Phco4g01034 597 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 15 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01034 Phco-Chr4 8202163 8203956 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Phco4g01034 PK_Tyr_Ser-Thr 8.7e-23 CL0016