Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01019 ATGCACACCACTCGACACGTCAAAGGTGGTCCCCCCAACGATTTCAGTTTTTCCCAGTCCCACCCACGCTGTGACTTTCTTTATTATGGGTTTCTGTGTCGCACGTGTGGAGCCGACTCAACCCTCGTTGGATGGGTCCCACACTCTCATTTCCTGGGTATAGGGCACCTCACCATTAGGTGTAGGGAGGGCCCCCTTGTATTTGGTATGAGTCATGTGGGGAAGTCCTCGCCGCAGAATTGGACTGTGGTATCCGTGATTGAGCTACAGCGCTACACTGTAAGGATGCTAATTGTTAACCAACAGTGTGAAAAGGGAGGGAGAGAGAAGGGAAAAAAAAAGGAGGAGAAGAATCTAAAAGGGAAGCAACCTTTCCATTTCCCCATCTTCAGCTGCAGTAGCACGAAGAAACTTGAAAGAACCTGGCCTAGCTTCTGTTCCGGTGACATAGGCACAGGCATAGACACAGATTCTGTACTTGTTGTGACGTGCAGAGGGAAGCGGAACGGGCTTTTGCTGGCCGGAACGATGACCGGAGGTGGATCGACGGGGAGGATGCCGACGTGGAAGGAGAGGGAGAACAACAAGCGGAGAGAGAGAAGACGGAGAGCGATTGCTGCTAAGATCTACTCCGGCCTTCGAGCTCAGGGGAACTACAAGCTTCCCAAGCACTGCGACAACAACGAGGTCCTGAAGGCTCTGTGCGCAGAGGCTGGCTGGATCGTGGAAGAAGATGGCACCACCTATAGAAAGGGATGCAAGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCTTCGATTCAGCCGAGTCCACAATCCTCCTCATTCCCGAGTCCTGCGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACGCGCATTGACCCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACACCACCTCTTTCCTCTCCCCGAACCTCTAAGCGCAAGGCCAACTTCGATTCCCTCTCCCACGCCTCCTTCCGCCACCCTCTTTTCGCCACTTCCGCCCCCTCCAGTCCCTCCCGCCGCCACCACTTCGCCACTTCCACCATCCCTGAGTGCGACGAGTCCGACGCTTCCAACGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCAGGTTCAGACCGCCGCGGGTCCTCCTTCCCCCACCTTCAACCTCATTAAACCCGCTATGCACCAGATCCCTGCCCAGGACGCCGTACAGTGGGGTTCGGTTGCGGAGATAGGAATAGGGGTGTCCGATTTTGACTTCGAGAATGGCAGAGTGAAACCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGAACTTACTCTGGGCTTCGGAAAAGCTTGA 1452 0.5503 MHTTRHVKGGPPNDFSFSQSHPRCDFLYYGFLCRTCGADSTLVGWVPHSHFLGIGHLTIRCREGPLVFGMSHVGKSSPQNWTVVSVIELQRYTVRMLIVNQQCEKGGREKGKKKEEKNLKGKQPFHFPIFSCSSTKKLERTWPSFCSGDIGTGIDTDSVLVVTCRGKRNGLLLAGTMTGGGSTGRMPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKRPTGSEIGGTPPNISACSSIQPSPQSSSFPSPAPSYHASPTSSSFPSPTRIDPNPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRTSKRKANFDSLSHASFRHPLFATSAPSSPSRRHHFATSTIPECDESDASNVDSASGRWVSFQVQTAAGPPSPTFNLIKPAMHQIPAQDAVQWGSVAEIGIGVSDFDFENGRVKPWEGERIHEVGMDDLELTLGFGKA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01019 483 MobiDBLite consensus disorder prediction 331 350 - -
Phco4g01019 483 MobiDBLite consensus disorder prediction 367 397 - -
Phco4g01019 483 MobiDBLite consensus disorder prediction 367 381 - -
Phco4g01019 483 MobiDBLite consensus disorder prediction 262 304 - -
Phco4g01019 483 MobiDBLite consensus disorder prediction 175 199 - -
Phco4g01019 483 Pfam BES1/BZR1 plant transcription factor, N-terminal 183 306 IPR008540 -
Phco4g01019 483 MobiDBLite consensus disorder prediction 251 304 - -
Phco4g01019 483 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 177 479 IPR033264 GO:0003700|GO:0006351|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01019 Phco-Chr4 8080468 8084273 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Phco4g01019 BES1_N 4e-63 No_clan