Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01018 ATGGAGGAGTGGGAAAGGGGTGGGAGAGAGAAGGGAAGAGAGGAAAAGAAGAATCTAAAAGGGAAGCAACCTTTCCATTTCCCCATCTTCAGCTGCAGTAGCACGAAGAAACTTGAAAGAACCTGGCCTAGCTTCTGTTCCGGTGACATAGGCACAGGCATAGACACAGATTCTGTACTTGTTGTGACGTGCAGAGGGAAGCGGAACGGGCTTTTGCTGGCCGGAACGATGACCGGAGGTGGATCGACGGGGAGGATGCCGACGTGGAAGGAGAGGGAGAACAACAAGCGGAGAGAGAGAAGACGGAGAGCGATTGCTGCTAAGATCTACTCCGGCCTTCGAGCTCAGGGGAACTACAAGCTTCCCAAGCACTGCGACAACAACGAGGTCCTGAAGGCTCTGTGCGCAGAGGCTGGCTGGATCGTGGAAGAAGATGGCACCACCTATAGAAAGGGATGCAAGAGACCCACGGGAAGTGAGATTGGAGGCACTCCACCCAACATAAGCGCGTGTTCTTCGATTCAGCCGAGTCCACAATCCTCCTCATTCCCGAGTCCTGCGCCTTCCTACCACGCTAGTCCAACCTCTTCCTCCTTCCCCAGCCCCACGCGCATTGACCCAAACCCCTCTTCCTTTCTCATCCCATTCATCCGCAACATAACTTCAATCCCCGCCAACCTTCCCCCTCTCAGGATATCCAACAGCGCCCCTGTCACACCACCTCTTTCCTCTCCCCGAACCTCTAAGCGCAAGGCCAACTTCGATTCCCTCTCCCACGCCTCCTTCCGCCACCCTCTTTTCGCCACTTCCGCCCCCTCCAGTCCCTCCCGCCGCCACCACTTCGCCACTTCCACCATCCCTGAGTGCGACGAGTCCGACGCTTCCACCGTCGACTCTGCCTCCGGCCGTTGGGTTAGTTTTCAGGTTCAGACCGCCGCGGGTCCTCCTTCCCCCACCTTCAACCTCATTAAACCCGCTATGCACCAGATCCCTGCCCAGGACGCCGTACAGTGGGGTTCGGTTGCGGAGATAGGAATAGGGGTGTCCGATTTTGACTTCGAGAATGGCAGAGTGAAACCTTGGGAGGGTGAGAGAATACACGAGGTGGGAATGGATGATTTGGAACTTACTCTGGGCTTCGGAAAAGCTTGA 1152 0.5625 MEEWERGGREKGREEKKNLKGKQPFHFPIFSCSSTKKLERTWPSFCSGDIGTGIDTDSVLVVTCRGKRNGLLLAGTMTGGGSTGRMPTWKERENNKRRERRRRAIAAKIYSGLRAQGNYKLPKHCDNNEVLKALCAEAGWIVEEDGTTYRKGCKRPTGSEIGGTPPNISACSSIQPSPQSSSFPSPAPSYHASPTSSSFPSPTRIDPNPSSFLIPFIRNITSIPANLPPLRISNSAPVTPPLSSPRTSKRKANFDSLSHASFRHPLFATSAPSSPSRRHHFATSTIPECDESDASTVDSASGRWVSFQVQTAAGPPSPTFNLIKPAMHQIPAQDAVQWGSVAEIGIGVSDFDFENGRVKPWEGERIHEVGMDDLELTLGFGKA 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01018 383 Pfam BES1/BZR1 plant transcription factor, N-terminal 83 206 IPR008540 -
Phco4g01018 383 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 77 379 IPR033264 GO:0003700|GO:0006351|GO:0009742
Phco4g01018 383 MobiDBLite consensus disorder prediction 1 20 - -
Phco4g01018 383 MobiDBLite consensus disorder prediction 267 295 - -
Phco4g01018 383 MobiDBLite consensus disorder prediction 162 204 - -
Phco4g01018 383 MobiDBLite consensus disorder prediction 75 99 - -
Phco4g01018 383 MobiDBLite consensus disorder prediction 231 250 - -
Phco4g01018 383 MobiDBLite consensus disorder prediction 151 204 - -
Phco4g01018 383 MobiDBLite consensus disorder prediction 267 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01018 Phco-Chr4 8071052 8075286 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Phco4g01018 BES1_N 2.5e-63 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01018 4 8071052 8075286 Phco4g01018 4 8071052 8075286 ECH