Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g01010 ATGCACACAAGCAAAGATAAAAGGGCCACAGTGATAAGAACCAAAAGCCCCCCTTCTCCTTCCCACACTCCACTTTCAAGCTTCAACAATTATCTTCTCCATCATTCACATCACAGAGCACAAGGTCACACCACAACACCTTCTGTTAGTCCTCACCAAGCGATGAGAGTTCCCGTTCCCTCATCCCCACAGACTAACCCAAAACCCACTAATAACGTAGTCCGTACCATTGCCCTTCCCAACCTCAACACTACGGGCCTCTGCTACGAGCCCACCTCCGTCCTCGACCTGTGCCGAAGCCCCAGCCCGGGCTCCGAGAAGCCCATCGATCACGCAGTTGTTGTGACGGACTCCCAAGATTGTCTGGACCTGGACGACCATGCGTTGCACAACTTGGATTGGGACTCCATCATGAAGGACTTGGGCTTACACGACGACTCAGGCGCTCACCTTCTGAAGACTATTCCCCATCCCGACAACAACAATAACAACCCATGCGATGACTTCACAATCGCACCCTTCGAACACGCGCTTGAATTCTCCACTCTCTCCGACATCTACTCCAACCAAAACCTCGCCTTCGATTTTAACCACCTTGTTCACGACTTCAGCAACCACCTTCACAACAACGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCGGATTGCTTCGACACCAAGCAATTACACGTGGCACAAGTGATATTGGAGCGGCTCAATCAACGGCTACGATCCCCCGTGGGAAAACCTCTCCAACGCGCGGCGTTTTACTTCAAAGAAGCTCTCCAGTCTCTTCTCTCCGGTTCGAACCGCACGCCCAGGATTTCCTCGCTGGTGGAAATCGTGCATGGCATCAGAACCTTCAAGGCCTTCTCCGGAATCTCGCCGATCCCAATGTTCTCGATCTTCACCACCAACCAGGTGGTTCTCGATCACGCTGCGTGCTCCTTCATGCACGTCATCGATTTCGACATCGGCCTCGGCATCCAATACGCTTCTCTCATGAAGGAGATAGCGGAGAAGTCCATGGACTCGCCGCTTCTCCGAATCACCGCCGTCGTTCCCGAAGAGTACGCCGTCGAGAGCACGCTGGTCCGGGAAAACCTGGCCCAGTTTGCTCTCGAACTCAGGATCCGCATCGAGGTCGACTTCGTTCCACTCCTAACCTTCGAGACGCTCTCCTTCAAGGCGGTGAAGCTCGTCGACGGCGAGAGCACCACCGTGCTCCTTTCGCCAGTGATTTTCCGCCACCTTGGAAATGCTGCCGCGTTCTTGGCGGACTTGCGGAGGGTATCTCCCAGTGTGGTGGTTTTTGTGGATGGCGAGGGGTGGGCGGATATGGCCACAGCAGCAGCCTCATCGTTCCGACGCGGCGTGGTGAGCAGTTTGGAGTACTACTCAATGATGTTGGAGTCGCTGGATGCGTCGACGGCTGGGGGAGGAGGGGAGTGGGTGAGGAGAATCGAGATGATGCAGCTGCGACCGAAGATTTTGGCGGCGGTGGAGAGTTCGTGGCGGCGGATGCCACCGTGGAGGGAGGCCTTTTACGGCGCCGGAATGAGGGCAGTTCAGTTGAGTCAATTCGCGGATTTCCAAGCAGAGTACTTGTTGGCGAAGTCGCAAATCAGAGGGTTCCACGTGGAGAAACGTCAGAACGAACTTGTACTATTCTGGCATGACCGAGCCATGGTTTCCTCGTCAGCTTGGCGGTTTTAG 1719 0.5509 MHTSKDKRATVIRTKSPPSPSHTPLSSFNNYLLHHSHHRAQGHTTTPSVSPHQAMRVPVPSSPQTNPKPTNNVVRTIALPNLNTTGLCYEPTSVLDLCRSPSPGSEKPIDHAVVVTDSQDCLDLDDHALHNLDWDSIMKDLGLHDDSGAHLLKTIPHPDNNNNNPCDDFTIAPFEHALEFSTLSDIYSNQNLAFDFNHLVHDFSNHLHNNGFDFIEELIRAADCFDTKQLHVAQVILERLNQRLRSPVGKPLQRAAFYFKEALQSLLSGSNRTPRISSLVEIVHGIRTFKAFSGISPIPMFSIFTTNQVVLDHAACSFMHVIDFDIGLGIQYASLMKEIAEKSMDSPLLRITAVVPEEYAVESTLVRENLAQFALELRIRIEVDFVPLLTFETLSFKAVKLVDGESTTVLLSPVIFRHLGNAAAFLADLRRVSPSVVVFVDGEGWADMATAAASSFRRGVVSSLEYYSMMLESLDASTAGGGGEWVRRIEMMQLRPKILAAVESSWRRMPPWREAFYGAGMRAVQLSQFADFQAEYLLAKSQIRGFHVEKRQNELVLFWHDRAMVSSSAWRF 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g01010 572 MobiDBLite consensus disorder prediction 14 34 - -
Phco4g01010 572 ProSiteProfiles GRAS family profile. 205 571 IPR005202 -
Phco4g01010 572 MobiDBLite consensus disorder prediction 42 72 - -
Phco4g01010 572 Pfam GRAS domain family 215 571 IPR005202 -
Phco4g01010 572 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 195 565 IPR005202 -
Phco4g01010 572 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g01010 Phco-Chr4 7987427 7989145 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco4g01010 GRAS 1.2e-78 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g01010 4 7987427 7989145 Phco4g01010 4 7987427 7989145 ECH
Phco4g01010 4 7987427 7989145 Phco8g00501 8 4791994 4793646 PCT