Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00992 ATGGTGAACAAAACTCCAAGCTCTGCCTCCAAACATCATAAACAACAGGGAAAGTCAGGAATAGATGTTACTAGAAGAACTATGAAGACCAAGATTAAAGTGTTGACAGATAAATTCCATGCTGAGAGAGGGCAATCAGTTAAAGAAAAAGTTCAAAGACATTGGAGGAATCTTGAGCCTGTTTCTCCAACGATTGAGAGAGTAATATCAGGGAATGAGTATTTGCGGGAAGGGAACGTCAATATGCTGTCTTTGAGAATTAACAATCCTTTATGTAAATTCACTGGGTTACCTGAAGCTACACTAGAGGAGGATCAAATCAATAATGTGGACATATCATCAGCAGAAAGTATTAGGATTCCAAACAAGGAAAAATTACCATCATATACGGCTTGGGTATATGTGGCCAGAAATGAGAGAATGGTTGATGATCAATCGGTCATAGGAAAATATCAAATGTACTATGACCAAAATAGAGGTGAAATGATGATATGCAGTGATAATGAGGAAGAGATACCAAATACCAAGGATGTTAAACATGAATTCACTGAGGCTGAAGATCAAATTCTGAGGATGACACTCGAGGAATACGGGTCTACTAAGGAGGTATTGGGTGTCATTAAAGAGATTGTTGAGACTAACGATTTACAAATTCAGGAGAGGTATGAAAAACTAAAGGAAAAGAATATAGAGAGTCCGGATCAACATTCTAAAGATTGTCATTGTAAAGGATGTGAAAATCATCTTGGAATATGTTTGGAGAAAAGATTGAGTGGTGGTTTAGAAACTTTTGATAAAATCTTCTGTCGTCGATGTTTGATCTTTGACTGTGCAATCCATGGCACTGATCAACCTTTAATATATCTTAGCGAAAAACATGTCTGCTCTGAACCTGAAGTTGGTAGGAAACCATGCAGTGATCAATGTTACCTTCTGGATAAAAGAATTACACCAATGGAAGAGGACTCGACATTGCCTCCTAATGAGCCTCAGAGTTCTTGTAAGCTGAAGAGAATCTCAGATGATATAATTATCAAAATTGGCAATCATTACAGTGAACTAAATTTGGATGCTAGTGACAAAGATAACCACACAACATCGCATGCATCTTTGAAAAGTCTAGATGAGCATGCGTCAAAGCAATTACCAGTTTCTGGTAGCTTTGACCATAGTGAGCGGGACAAAGGAGTTACGAATGGACAAAAAGATCTTACGAAGGAGATAGAATTTAACGAGATGTCCATTTCAAAGGAAGTGCAAGCTGATGAGATGACAAGTGACTCAGATTGGAGACCTCTAGAGAGAGATTTATATTTGAAGGGAGTAGAAATGTTTGGAAAAAATAGTTGCCTTATAGCCGCTACCTTACTTCCTGGCTTGAAGACTTGCTTGCAAGTAGCTAGGTATATGTTTGCTGGTGGAGAGTCAATGATCCATGGATCCACACCAAATTCAATCGTGGATAGAAATGAAAAGATCAATCCAGAGTGTACAGACGTAGAAATGTTATCAAGATCAAGGTCACAACGGAAAAAGGGAAAACCTAGGAAGTTCAACTATACTCGAAAGTCTGCTGGTCTCCCACCTAGATGGAGAAAAATTGCTTATGGCCAAAACCTGTGTAATAAGCAATATACTCCTTGTGGGTGTCATGGAATGTGTGGAAAGGACTGTTCTTGTCTTCTTAATGGAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGCTATGCAAAAATCGATTCAGAGGATGTCATTGTACCAAGAGTCAATGCAGAAGTCGATTGTGTCCGTGCTTTGCAGCCAATCGTGAGTGTGACCCAGATGTCTGTCGAAATTGTTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGATGGTAAATGCGGAAATATGAATATTCTTTTAGGACAAAAAGAGAGGATTCTTTTGGCAAAGTCAGATGTTACAGGATGGGGAGCATTTGCAAAGAACCCAATTAACAAAAATGTTTGCCTAGGAGAGTACAAGGGTGAACTAATTCCTCCTAAAGAAGCAGAAAAACGTGGGAAGCTATATGATCGTATCAACACTTCCTTCCTTTTTAACCTCAATAATAAGTGGGTTATTGATGCTCATCGTCTAGGAGACAAATTAAAATTTGCGAACCATTCATCAAAACCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGAACACCGAGTCGGAATATTTGCCAAGGAAAACATTCAAGCTGGTGATGAGATTTTTTATGACTATTGGTATGATCTAGATTGCGCACCATCATGGGCTCTTCCACCGGAAGAAAATGCTTCCAAAAAAGATGAATCAGTTACTTCTCAAACCAAGACCAAGAAACGTTAG 2379 0.3918 MVNKTPSSASKHHKQQGKSGIDVTRRTMKTKIKVLTDKFHAERGQSVKEKVQRHWRNLEPVSPTIERVISGNEYLREGNVNMLSLRINNPLCKFTGLPEATLEEDQINNVDISSAESIRIPNKEKLPSYTAWVYVARNERMVDDQSVIGKYQMYYDQNRGEMMICSDNEEEIPNTKDVKHEFTEAEDQILRMTLEEYGSTKEVLGVIKEIVETNDLQIQERYEKLKEKNIESPDQHSKDCHCKGCENHLGICLEKRLSGGLETFDKIFCRRCLIFDCAIHGTDQPLIYLSEKHVCSEPEVGRKPCSDQCYLLDKRITPMEEDSTLPPNEPQSSCKLKRISDDIIIKIGNHYSELNLDASDKDNHTTSHASLKSLDEHASKQLPVSGSFDHSERDKGVTNGQKDLTKEIEFNEMSISKEVQADEMTSDSDWRPLERDLYLKGVEMFGKNSCLIAATLLPGLKTCLQVARYMFAGGESMIHGSTPNSIVDRNEKINPECTDVEMLSRSRSQRKKGKPRKFNYTRKSAGLPPRWRKIAYGQNLCNKQYTPCGCHGMCGKDCSCLLNGTCCEKYCGCSKLCKNRFRGCHCTKSQCRSRLCPCFAANRECDPDVCRNCWVSCGDGSLGEPPRRGDGKCGNMNILLGQKERILLAKSDVTGWGAFAKNPINKNVCLGEYKGELIPPKEAEKRGKLYDRINTSFLFNLNNKWVIDAHRLGDKLKFANHSSKPNCYAKVMLVGGEHRVGIFAKENIQAGDEIFYDYWYDLDCAPSWALPPEENASKKDESVTSQTKTKKR 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00992 792 SMART set_7 644 767 IPR001214 GO:0005515
Phco4g00992 792 MobiDBLite consensus disorder prediction 387 406 - -
Phco4g00992 792 MobiDBLite consensus disorder prediction 770 792 - -
Phco4g00992 792 Gene3D SET domain 545 760 IPR046341 -
Phco4g00992 792 CDD SET_EZH 644 760 - -
Phco4g00992 792 SUPERFAMILY SET domain 514 762 IPR046341 -
Phco4g00992 792 SMART CXC_2 579 616 IPR033467 -
Phco4g00992 792 MobiDBLite consensus disorder prediction 383 406 - -
Phco4g00992 792 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 28 792 IPR025778 GO:0031519
Phco4g00992 792 MobiDBLite consensus disorder prediction 774 792 - -
Phco4g00992 792 Pfam SET domain 655 758 IPR001214 GO:0005515
Phco4g00992 792 FunFam Putative histone-lysine N-methyltransferase EZH2 545 761 - -
Phco4g00992 792 ProSiteProfiles CXC domain profile. 531 630 IPR026489 -
Phco4g00992 792 Pfam CXC domain 583 614 IPR041355 -
Phco4g00992 792 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 24 779 IPR045318 GO:0006338|GO:0042054
Phco4g00992 792 MobiDBLite consensus disorder prediction 1 25 - -
Phco4g00992 792 ProSiteProfiles SET domain profile. 644 759 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00992 Phco-Chr4 7850429 7861200 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Phco4g00992 SET 6.8e-12 No_clan