Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00961 ATGGCATCATCTTGGACTCCAAGGCAAAACAAACTATTTGAAGAAGCTCTTGCTACATATGATAGGGACACCCCTGACAAGTGGCAGAATGTGGCAAGAGTAGTGGGAAAATCCGTAGATGAAGTTAAAAGGCACTTTGAGATCCTCAAAGAAGATGTCAAACGCATTGAGCGTGGACAGATCCCATTGCCTAATTACACAGTACGCAACGCCCTTCTCAAACTTTTACATTTCAGTTTAAACCCTAGCGAAGGGTTTAAGCTCGCGCTATACCAAGCTTCTTCATGA 288 0.434 MASSWTPRQNKLFEEALATYDRDTPDKWQNVARVVGKSVDEVKRHFEILKEDVKRIERGQIPLPNYTVRNALLKLLHFSLNPSEGFKLALYQASS 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00961 95 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Phco4g00961 95 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 68 IPR044636 GO:0003700
Phco4g00961 95 Gene3D - 2 63 - -
Phco4g00961 95 FunFam Transcription factor SRM1 1 63 - -
Phco4g00961 95 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Phco4g00961 95 SMART sant 1 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00961 Phco-Chr4 7603236 7607032 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00476 8 4501007 4503260 Phco4g00961 4 7603236 7607032 ECH
Phco4g00961 4 7603236 7607032 Phco4g00961 4 7603236 7607032 ECH
Phco9g00506 9 3693116 3694295 Phco4g00961 4 7603236 7607032 ECH
Phco4g00961 4 7603236 7607032 Phco8g00476 8 4501007 4503260 ECH