Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00888 ATGAACTCAACTCTCGGTGATTTTGGGAAACCTTCATTACGTCTAAAGTCAAGTGTGGTGGGTATTAATAGTGGTGGTGAATTTGATGCAGTACCAGAATTTGCTATGATGGAGTCGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTACTATCTGAGGAAGAAGGTGGCTTCCCAAAAGATTGACCTTGACGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGATAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCTACCATGGCGGGCTTTTGGAAGGCTACAGGAAGAGACAAAGCAGTGTATGACAAGGCAAAACTAATTGGGATGAGAAAAACCCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAATCTGATTGGATCATGCACGAGTATAGACTTGAATCGGATGAGAATGGACCTCCACAGGAGGAAGGATGGGTTGTGTGCAGAGCCTTCAAGAAAAAAACCACTGGACAAACAAAGACTAGTGAAGGATGGGACTCAAGCTACTTCTTTGAGGAAGCAAGTGGGTTAAGCACTGTGGTTGATCCAATTGATCTCATTTCAAGGCAGTCTCACAGCTTTTTAGCTCAAAATTTCATGTGTAAGCAAGAGATAGAGGCAGATAACTTGAGTTGCATGCTCCAAGATCCATTTGTACAACTTCCTCAGCTAGAAAGCCCGTCTTTGCCATTAGTGAAGAGGCCAAGTACAGTGTCACTAGTATCAGACAATAACGAAGATGAAGACATTCAAAACAGGTTATCCAACAACACAAAGAAAGTGACTGATTGGAGAGCTCTTGACAAGTTCGTAGCCTCTCAACTGAGTCAAGAAGACACGCTTGAAACCAATGGATTCTCAAGCTTTGAACCCCATGATAGCCACGACATGGCACTGCTGCTACTGCAGAGTAGTAGGGATGAAGGGAACAAGCTAAGCCCGTTTCTGAACACAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAATGA 1116 0.4346 MNSTLGDFGKPSLRLKSSVVGINSGGEFDAVPEFAMMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQDRCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTSEGWDSSYFFEEASGLSTVVDPIDLISRQSHSFLAQNFMCKQEIEADNLSCMLQDPFVQLPQLESPSLPLVKRPSTVSLVSDNNEDEDIQNRLSNNTKKVTDWRALDKFVASQLSQEDTLETNGFSSFEPHDSHDMALLLLQSSRDEGNKLSPFLNTSSDCDIGICVFEK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00888 371 ProSiteProfiles NAC domain profile. 44 193 IPR003441 GO:0003677|GO:0006355
Phco4g00888 371 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 41 284 - -
Phco4g00888 371 Pfam No apical meristem (NAM) protein 45 172 IPR003441 GO:0003677|GO:0006355
Phco4g00888 371 Gene3D NAC domain 53 197 IPR036093 GO:0003677|GO:0006355
Phco4g00888 371 SUPERFAMILY NAC domain 36 193 IPR036093 GO:0003677|GO:0006355
Phco4g00888 371 FunFam NAC domain-containing protein 53 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00888 Phco-Chr4 6990045 6993684 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco4g00888 NAM 6.4e-38 No_clan