Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00885 ATGGTTCCTAGTGAGATAAGAGGAGTCCACTATCTAGCACCTGAAAATCCATTCCTAGTTCCACCCAACTTTGGCCTTCTGCAGAATGACGTCCCAAACCTCCATCTGAACACCCTCCTAAGCAACTTTCCAAACTGCCACTTCCCTCCCTCAGGCCTTGAATTTGTTGCTCCTCACTCATGCCTCAGCAGCAACTCAACCTCTGATGAAGCTGATGAAATTCAGTTTAACATCATCGACGAAAGGAAGCACAGGAGAATGATATCCAACCGAGAATCCGCCCGCAGATCAAGGATGAGGAAGCAAAAGCACTTGGATGAACTGTGGTCACAGGTTGTTAGGCTCAGAACTGAGAACCACAACCTGATTGACAAACTCAACCATATGTCCGACTCCCATGACAGAGTCCTCCAAGAGAATACACGCCTCAAGGAAGAAGCTTCTGATCTTCGCCAAATGCTAGCAGACATGCAAATTGGAACCTCCTTTGCTTGCACCATGGAGGAATTGGAGGACCTTCCCTGCAACAAACCTGGTCCCTCAAACCAATTAATCACTCCTGCAGACATGATTCATGAATGA 582 0.4725 MVPSEIRGVHYLAPENPFLVPPNFGLLQNDVPNLHLNTLLSNFPNCHFPPSGLEFVAPHSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHMSDSHDRVLQENTRLKEEASDLRQMLADMQIGTSFACTMEELEDLPCNKPGPSNQLITPADMIHE 193
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00885 193 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 85 100 IPR004827 GO:0003700|GO:0006355
Phco4g00885 193 Gene3D - 80 135 - -
Phco4g00885 193 SMART brlzneu 78 142 IPR004827 GO:0003700|GO:0006355
Phco4g00885 193 Coils Coil 133 153 - -
Phco4g00885 193 MobiDBLite consensus disorder prediction 174 193 - -
Phco4g00885 193 Pfam bZIP transcription factor 82 140 IPR004827 GO:0003700|GO:0006355
Phco4g00885 193 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 80 143 IPR004827 GO:0003700|GO:0006355
Phco4g00885 193 SUPERFAMILY Leucine zipper domain 82 132 IPR046347 GO:0003700|GO:0006355
Phco4g00885 193 CDD bZIP_plant_GBF1 83 134 IPR045314 GO:0003700|GO:0006355
Phco4g00885 193 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 165 IPR044521 -
Phco4g00885 193 FunFam BZIP transcription factor 80 131 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco4g00885 Phco-Chr4 6963634 6964215 Dispersed/Transposed
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco4g00885 bZIP_1 3.3e-13 CL0018