Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00878 ATGCAGCCTGCAAGGAAATCCAAAACGGTTTCGTGGGCTCCTGGATTTCCTCTTTGTCAGGTAAAAAATTTCACATCCGAGGATTGTTCTTCAAAAATTGGAAACAAATCCAAAGCTGATTTTCAAGCAAAGACAGTGTCCACATGCCCTTCAACCCTTGAATATGATGATTTGCCACCTGGATTTGAAGGATATCATTTCCAGAATCCATCAAAGTCAGCATTTTCTTACATTAAATGGGAATGCCCTCCTTCGTTTGTTTTGAATAGTTGTTGGAGCGTTGCAGCTGGTGAACAAAGTGTGGATAAATATGATGAGATGCTAAGAGAAATGAGAGTGTCTGAACCATATTATCCTTGTATTTCTGCTATTCCTCCAAGCCCTTTTGTTTCATTTAACTTGGAGAATGAATGCTATGATGATAGTCTTACTCCTGTCATCCCTCTTATTCCCATTGAGGAATATGAATCAGTAACAGGTATGAAACCTGATGTTTCTGTCACAAAACATGGAAACTCTCTCTCCAAACTGCAGACACAAAACACACAGCAATACATTCCACCGGCAACATCTTCCGAGGCAAATTTCGTTGCAGCTTCTATTGCTGCTGTTTTATCTGCCATCTTAAAAAGCATCGAGGAAGGAATCTTGATGATTGATGTTGATTTTCTCCTTAAAATAGCTAATGACCCAAAAATGATTAGGAAAATAATGGAAGAATATTCAACTACCACCACTGGGATGAGTACACCCTCAAGAACTGTGAGTGCAAGACAATCAACTCCATCAAATTCACTGTTGGCCCTCACCCCTGAAATGTGTGAAATTCCATCTATTTCATTGCTGGCATATGCACACGATAATCATTTAACTGCAACTCCACTTGTTCCTTTGTCTGGGCCTGTATCTGCTCATACAACAACCATGACTCACTCAGTGGCAATAACAACTGCACCTCATGTGCACATGCCAGTGAAAGATGTCAATTACTATAGAAACCTTGTTAGAAAATATGGTGGTATCAGTGAGCCAGACATGCAGAATCATAATTTCCAAGCTTATAAACGAGCACGTGTTCTTAACCCAGAGGAAGTGAAAAGGAAAATTCAGAAATCATGCAAATACTATAAAAGTTCAAGGGGTTGTGGCCATGGTTCCAAATGCCGTTATCTGCATGATAAAGTGTGGAGGATGTAA 1197 0.3977 MQPARKSKTVSWAPGFPLCQVKNFTSEDCSSKIGNKSKADFQAKTVSTCPSTLEYDDLPPGFEGYHFQNPSKSAFSYIKWECPPSFVLNSCWSVAAGEQSVDKYDEMLREMRVSEPYYPCISAIPPSPFVSFNLENECYDDSLTPVIPLIPIEEYESVTGMKPDVSVTKHGNSLSKLQTQNTQQYIPPATSSEANFVAASIAAVLSAILKSIEEGILMIDVDFLLKIANDPKMIRKIMEEYSTTTTGMSTPSRTVSARQSTPSNSLLALTPEMCEIPSISLLAYAHDNHLTATPLVPLSGPVSAHTTTMTHSVAITTAPHVHMPVKDVNYYRNLVRKYGGISEPDMQNHNFQAYKRARVLNPEEVKRKIQKSCKYYKSSRGCGHGSKCRYLHDKVWRM 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00878 398 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 288 396 - -
Phco4g00878 398 ProSiteProfiles Zinc finger C3H1-type profile. 367 395 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00878 Phco-Chr4 6915631 6919455 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phco4g00878 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g00419 8 3786279 3792128 Phco4g00878 4 6915631 6919455 PCT