Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00871 ATGGAACCTCAACAACCACAAGGGAGCCAACCAAACGAGGATGGTGGCAGTGGAAAAGGGGGCTTTCTCAGCAGGCAAAGCAGTACACGGTGGACTCCCACAACCGACCAGATAAGAATATTGAAGGACCTTTACTACAACAATGGAATTAGATCCCCAAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGACCTGCCCCAACTAATGCTGCTCCTCCTTGGAAACCTGATCAAGATCCTATTCATACCAAGTATTCCAACATTTCTTCTACAGGGATCTCTTCTGCATCATCTTCTTCTGTTGAGATGATTACTGTCGGGCAGATGGGGAATTATGGCTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGTTCAATATCTGCTGGTGGTAGCAGTGGCCATGTTGGAATAAACCACAACTTGGGATGGGTTGGTGTGGATCCTTATTCCTCAGCCTACGCCACCTTCTTTGACAAAATAAGGCCAAATGAAGAAACCCTGGAAGAAGAAGAAGAAGAAGAGGATGGTGGTGCTGAGATTGAAACTCTCCCTTTATTCCCTATGCACGGTGAGGACATTCATGGCTACTGCAACCTCAAGTCTAATTCTTACAACTATGATGGAAACGGGTGGTATCATTCTGAAGACGGGTTCAAGAATGGTTCTCGTGCTTCTCTGGAGCTCAGTCTGAACTCCTACACTCGCAGATCTCCAGATTTCGCTTAA 846 0.4598 MEPQQPQGSQPNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRPAPTNAAPPWKPDQDPIHTKYSNISSTGISSASSSSVEMITVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGINHNLGWVGVDPYSSAYATFFDKIRPNEETLEEEEEEEDGGAEIETLPLFPMHGEDIHGYCNLKSNSYNYDGNGWYHSEDGFKNGSRASLELSLNSYTRRSPDFA 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00871 281 ProSiteProfiles 'Homeobox' domain profile. 24 90 IPR001356 GO:0003677
Phco4g00871 281 Pfam Homeodomain 28 89 IPR001356 GO:0003677
Phco4g00871 281 SUPERFAMILY Homeodomain-like 22 96 IPR009057 -
Phco4g00871 281 MobiDBLite consensus disorder prediction 88 116 - -
Phco4g00871 281 SMART HOX_1 26 94 IPR001356 GO:0003677
Phco4g00871 281 Gene3D - 23 89 - -
Phco4g00871 281 MobiDBLite consensus disorder prediction 1 34 - -
Phco4g00871 281 CDD homeodomain 29 91 IPR001356 GO:0003677
Phco4g00871 281 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 8 276 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00871 Phco-Chr4 6837461 6838989 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco4g00871 Homeodomain 1.6e-17 CL0123