Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00864 ATGGGAATCTGTTTCTCCGCCACCAAAGTCAGCGGCTCCAGCAGCAACAACGCCGGCGCCTCCAATCGCAACCGAAAATGCTCGGCTCCGATATCGGCGCCGGTGACGTTGCAGCCCCTGACGACGCAAAAGCAACAGTCGTCGCATGGTCAACGGCGGCGCGTACCAGAGGATTCGAGGAAGAACCCACGCGCCAAGGAGAAAACGAGCGGGCGTCGCCAAGGGGGGAACCTCCCCTGCGGAAAGCGAACGGATTTTGGGTACGAGAAAGACTTCGACAAGAAATTCTCGCTCGGGAAGTTGTTGGGACACGGCCAATTCGGATACACCTACGTTGGGATAGACAAAGCAAATGGGGATCGCGTCGCCGTTAAGAGACTCGAGAAAAACAAGATGGTTCTCCCTATAGCGGTTGAGGATGTTAAGCGTGAAGTCAAGATATTGAAAGAACTTACAGGCCATGAAAACGTGGTTCAGTTCTATAATGCTTTTGAGGATGATTCATACGTGTACATAGTTATGGAGTTATGTGAGGGTGGAGAACTGCTAGATCGGATATTGGCCAAGAAGGACAGTCGTTATACTGAAAAAGATGCAGCTGTGGTTGTAAGGCAGATGCTTAAGGTTGCGGCTGAGTGTCATTTACATGGGTTGGTTCATCGGGACATGAAACCAGAGAATTTTCTTTTCAAATCAACCAGAGAAGATTCACCATTAAAAGCTACCGATTTTGGTTTGTCTGATTTCATAAAGCCTGGGAAGAGGTTTCCAGACATTGTTGGCAGTGCTTACTATGTTGCACCAGAAGTGTTGAAACGAAAGTCAGGGCCTGAGTCAGATGTATGGAGTATTGGTGTGATTACATACATATTGCTTTGTGGGAGACGTCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGGAACAAGCCTGACTTCCGACGGAAACCATGGCCAACCATAAGCAACTCTGCAAAAGATTTTGTGAAGAAATTGTTGGTAAAAGATCCCCGAGCAAGATATACTGCTGCTCAGGCTCTATCACATCCCTGGGTTAAAGAAGGTGGAGAGGCATTAGAGATTCCTATTGACATATCTGTCCTGAACAACATGCGACAGTTTGTGAGATATAGTCGGTTGAAACAGTTTGCACTAAGGGCATTGGCTAGCACACTTAATGAAGAAGAGTTGTCTGATTTAAAAGATCAGTTTGATGCAATAGACGTGGACAAAAATGGTTCTATTAGTCTTGAAGAGATGAGACTGGCTCTTGCTCAAGATCTCCCTTGGAAGTTGAAAGAATCACGTGTGCTAGAGATATTGCAAGCGATAGACAGCAACACAGACGGGCTAGTGGATTTCACTGAGTTTGTAGCAGCTACGTTACATGTACATCAGTTGGAGGAACATGATTCTTTTAAGTGGCAGCAACGGTCACAAGCTGCTTTTGAGAAATTTGACCTGGACAAGGATGGCTACATTACTCCAGATGAACTTAGAATGCATACGGGTTTGAGAGGCTCCATCGATCCGTTGCTTGAGGAAGCCGATATTGATAAAGATGGAAAGATCAGCTTATCAGAATTCCGCAGACTTCTAAGAACTGCAAGCATAGGTTCTCGAAACGTGTTGAGCCCGAATCAGCTTCGTCGAAAGATGTAG 1674 0.4618 MGICFSATKVSGSSSNNAGASNRNRKCSAPISAPVTLQPLTTQKQQSSHGQRRRVPEDSRKNPRAKEKTSGRRQGGNLPCGKRTDFGYEKDFDKKFSLGKLLGHGQFGYTYVGIDKANGDRVAVKRLEKNKMVLPIAVEDVKREVKILKELTGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTREDSPLKATDFGLSDFIKPGKRFPDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARYTAAQALSHPWVKEGGEALEIPIDISVLNNMRQFVRYSRLKQFALRALASTLNEEELSDLKDQFDAIDVDKNGSISLEEMRLALAQDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEEHDSFKWQQRSQAAFEKFDLDKDGYITPDELRMHTGLRGSIDPLLEEADIDKDGKISLSEFRRLLRTASIGSRNVLSPNQLRRKM 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00864 557 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Phco4g00864 557 Gene3D Phosphorylase Kinase; domain 1 89 181 - -
Phco4g00864 557 MobiDBLite consensus disorder prediction 7 49 - -
Phco4g00864 557 MobiDBLite consensus disorder prediction 50 71 - -
Phco4g00864 557 FunFam Calcium-dependent protein kinase 28 397 466 - -
Phco4g00864 557 ProSiteProfiles EF-hand calcium-binding domain profile. 399 434 IPR002048 GO:0005509
Phco4g00864 557 SMART efh_1 403 431 IPR002048 GO:0005509
Phco4g00864 557 SMART efh_1 512 540 IPR002048 GO:0005509
Phco4g00864 557 SMART efh_1 482 510 IPR002048 GO:0005509
Phco4g00864 557 SMART efh_1 440 468 IPR002048 GO:0005509
Phco4g00864 557 CDD STKc_CAMK 95 355 - -
Phco4g00864 557 ProSiteProfiles Protein kinase domain profile. 96 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00864 557 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Phco4g00864 557 Gene3D - 375 466 - -
Phco4g00864 557 Pfam EF-hand domain pair 402 465 IPR002048 GO:0005509
Phco4g00864 557 Pfam EF-hand domain pair 484 537 IPR002048 GO:0005509
Phco4g00864 557 Pfam Protein kinase domain 98 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00864 557 Gene3D Transferase(Phosphotransferase) domain 1 182 374 - -
Phco4g00864 557 ProSitePatterns Protein kinases ATP-binding region signature. 102 125 IPR017441 GO:0005524
Phco4g00864 557 SUPERFAMILY EF-hand 385 538 IPR011992 -
Phco4g00864 557 FunFam calcium-dependent protein kinase 28-like 182 375 - -
Phco4g00864 557 SUPERFAMILY Protein kinase-like (PK-like) 94 369 IPR011009 -
Phco4g00864 557 Gene3D - 382 536 - -
Phco4g00864 557 MobiDBLite consensus disorder prediction 1 82 - -
Phco4g00864 557 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Phco4g00864 557 ProSitePatterns EF-hand calcium-binding domain. 412 424 IPR018247 -
Phco4g00864 557 PANTHER SERINE/THREONINE-PROTEIN KINASE 74 530 - -
Phco4g00864 557 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Phco4g00864 557 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Phco4g00864 557 FunFam CDPK-related kinase 1 89 181 - -
Phco4g00864 557 SMART serkin_6 96 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00864 557 ProSiteProfiles EF-hand calcium-binding domain profile. 516 543 IPR002048 GO:0005509
Phco4g00864 557 ProSiteProfiles EF-hand calcium-binding domain profile. 478 513 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00864 Phco-Chr4 6739603 6744892 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Phco4g00864 Pkinase 3.9e-68 CL0016