Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00808 ATGGTGATCGAGCATGACATTGAGAGCTGCGGGAGCAGAGCAGTGCAGTTGTCGCACGCTAACCACCCTCGACACCAACGCCAGAAACTGGAGGTGTACAATGAGGTGCTGCGGCGGATTCAGGATTCCGATTGCGAGGAGGCGCACGTTCCCGGCTTCGATGATCAGCTTTGGCTTCACTTCAATCGCCTACCTGCTAGGTACGCGTTGGATGTAAATGTTGAGAGGGCAGAAGATGTTCTAGCTCATAAGAGATTGCTCAAGTTGGCGGAAGATCCTGCATCTCGACCTGCATTTCAAGTTCGCTTAGTACAGGTATATCCTTTTGGTGGTGCAAATTATGCTGATTCCATACATTCAGATCCTTCTGAAATAGAAGATGCACAGAGTTCTCTTAACTATTCTTTAAAGCAGGGAATCCATCCACCACCCACATTTGGTTCATCCTCTAATCTTGAAGCTCTTGCCCTTCAAACAACCAAAAATAACATTGAAGATGGGGGAAGTGCTATGAGTGTAACACCATATTTTCACAGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTTAGTCAGTTAACATCAATACTTGGTGAGATGGGACTGAATATTCAAGAAGCTCATGCATTTTCCACCACTGATGGATTTTCTCTGGATGTCTTTGTTGTTGAGGGATGGCCCAATGAGGAAACTGAGGAGCTGAAAGGTGTGTTAGAAAAGGAAATTTACAAGGTTAAGGAGCAAAATATGTCAAATCAGGGCATACATTATGCTGCCAATGAACATTACCAGACAAGGATAGAACCATCCCCTCATTGCATTCAAATACCAACTGATGGAGCTGATGTCTGGGAACTTGATACCAACCAGCTGAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTATAGAGGTACATATTGCAGTCAAGATGTTGCTATCAAAGTTCTCAAGCCTGAGCGCATAAGTACAGATATGCTGAAGGAGTTTGCACAAGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATCGGCGCATGTACCAGGCCCCCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGGGGAAGCTTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAGTGGTAAAGGTTGCTGATTTTGGGGTTGCTAGAGTGCAAACTCAGTCTGGTGTGATGACAGCTGAAACTGGAACATACCGTTGGATGGCTCCCGAGGTCATTGAACACAAACCATATGATCAGAAGGCAGATGTTTTCAGTTTTGGAATAGCTCTCTGGGAGCTTTTAACTGGAGAACTACCGTACTCTTGCTTGACCCCATTACAAGCAGCAGTCGGCGTGGTGCAGAAGGGCCTAAGGCCTACAATTCCAAAAACCACACACCCAAAACTTTCTGAACTGCTTCAGCGGTGCTGGCAACAAGATCCGACTCTCAGACCAGATTTCTCTGAAACAATAGAAATTCTTCAGCTCATAGCAAAAGAGGTCAATGATCACAAGGATAAATCACCCCATGGCTTTCTCTCAGCTCTTAGACGGGTCCATCATTGA 1719 0.438 MVIEHDIESCGSRAVQLSHANHPRHQRQKLEVYNEVLRRIQDSDCEEAHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPASRPAFQVRLVQVYPFGGANYADSIHSDPSEIEDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQTTKNNIEDGGSAMSVTPYFHRPMHEITFSTVDKPKLLSQLTSILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKGVLEKEIYKVKEQNMSNQGIHYAANEHYQTRIEPSPHCIQIPTDGADVWELDTNQLKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSCLTPLQAAVGVVQKGLRPTIPKTTHPKLSELLQRCWQQDPTLRPDFSETIEILQLIAKEVNDHKDKSPHGFLSALRRVHH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00808 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 199 551 - -
Phco4g00808 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Phco4g00808 572 CDD STKc_MAP3K-like 302 545 - -
Phco4g00808 572 FunFam serine/threonine-protein kinase HT1 375 565 - -
Phco4g00808 572 Gene3D Transferase(Phosphotransferase) domain 1 375 563 - -
Phco4g00808 572 SUPERFAMILY Protein kinase-like (PK-like) 272 545 IPR011009 -
Phco4g00808 572 ProSitePatterns Protein kinases ATP-binding region signature. 302 323 IPR017441 GO:0005524
Phco4g00808 572 ProSiteProfiles Protein kinase domain profile. 296 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00808 572 Pfam Protein tyrosine and serine/threonine kinase 296 544 IPR001245 GO:0004672|GO:0006468
Phco4g00808 572 CDD ACT_TyrKc 181 247 - -
Phco4g00808 572 FunFam Serine/threonine-protein kinase isoform 1 286 374 - -
Phco4g00808 572 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Phco4g00808 572 SMART serkin_6 296 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00808 572 ProSiteProfiles ACT domain profile. 183 258 IPR002912 -
Phco4g00808 572 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Phco4g00808 572 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Phco4g00808 572 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Phco4g00808 572 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Phco4g00808 572 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Phco4g00808 572 SUPERFAMILY ACT-like 181 249 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00808 Phco-Chr4 6226391 6239155 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco4g00808 PK_Tyr_Ser-Thr 4.1e-74 CL0016