Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00770 ATGGATTTCTCGCAGACCAACAATACCACTTTGCTCACCAACCTACTAGTCTTCAACAACACCGTCCAACCAGAGTTGATGAGGAGCCTGCATGTGTACCGGCAAGGGAATGGGGAGGAAAGGACAGTTGAGAGGGAGTTTGTGTTTTCAGACTGTGGCTCCTATGTGGAAATGCAGGCTACCCCAGTTCTTAGATTGGTGAAATCCCATGTTTCTGAAGTGTGCGAAGGGTACAAAAATGGAGTGTGGCTTTGTATCTTAGCGTTTCATGCCGATCACACTCCTCAATTTTGCCGCATTCCTCCGCTTTTGTTGGCCTCAAGAAACCCAAAGCTTCAGATGATTCCAAACCTTCTCCGTGATCTCCACATGATATACAAGTTGGACAGGAAGGAGGAAGACAAAGATACAACTCTAGGCTCTACAGGGGAAGAATGTCAAGGGAACAGCAACAATTTCCAACCATTTGAAAAAGTCTTTCCCGTTCTTGATCAGGATCTCAATTATCTTCCTTACGAAGAAGACGAGTCTGAGTTACTGGACAACAAGACAGATGTAGAAAGCTCACCAGGTTTGCCAGGGAAAAAAAAGAGAGCACCCAGTGACCTTGTAGCAAAAATTTCCTTATCAGATTTGGTCCAGTACTTTGGTATGCCTATTGTAGAAGCATCAAGAAATCTAAAAGTTGGGCTTACTGTTCTCAAGAGAAAGTGCAGAGAATTTGGGATTCCCCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCAGGATCTTCAGGAAGAGGCACAGAACCAAGAATTGGAGAACATGGAAGCAGCAATGGCAGTGACCAAGAGACAAAAGATGTTGGAGAGTGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATTCAAAGTGAGACCAAGAGATTCCGGCAAGATGTTTTCAAGAGAAGACACAGAGCAAGAGCTGTTGGAAAACAGAATTCTACTGTATCCAACACATAG 999 0.4404 MDFSQTNNTTLLTNLLVFNNTVQPELMRSLHVYRQGNGEERTVEREFVFSDCGSYVEMQATPVLRLVKSHVSEVCEGYKNGVWLCILAFHADHTPQFCRIPPLLLASRNPKLQMIPNLLRDLHMIYKLDRKEEDKDTTLGSTGEECQGNSNNFQPFEKVFPVLDQDLNYLPYEEDESELLDNKTDVESSPGLPGKKKRAPSDLVAKISLSDLVQYFGMPIVEASRNLKVGLTVLKRKCREFGIPRWPHRKIKSLDSLIQDLQEEAQNQELENMEAAMAVTKRQKMLESEKENIEKKPFMDIQSETKRFRQDVFKRRHRARAVGKQNSTVSNT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00770 332 Coils Coil 251 296 - -
Phco4g00770 332 PANTHER PROTEIN RKD4 186 326 IPR044607 GO:0003700
Phco4g00770 332 MobiDBLite consensus disorder prediction 178 199 - -
Phco4g00770 332 ProSiteProfiles RWP-RK domain profile. 189 274 IPR003035 -
Phco4g00770 332 Pfam RWP-RK domain 207 254 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00770 Phco-Chr4 5930318 5935206 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Phco4g00770 RWP-RK 3.4e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00770 4 5930318 5935206 Phco4g00770 4 5930318 5935206 ECH