Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00733 ATGGAGTTTGAGCCTTTGAGTCTAGGCAACGAGGTTATTGAATTTGATATGATTGGTTTGGGGTATGAGGCTACCATTGACATGGAGCACCCTATTGAGGATGACGAGGACCTTGTTAATATTGATTATAGTTCAGCTGCTGCTAATTCTGTTCTTGCTGCTGGTGTGGGACCTCACATTTTTGGAGGGGACACTAATCTTGAACCTTGTCAAGGTATGGACTTTGAATCAGAAGAGGCTGCAAAGGCCTTCTACAATTCCTATGCTCGCCGTGTTGGCTTTAGCACGCGGGTGAGCATGTCTCGGCGCTCCAGGCGCGACGGTTCTATAATTCAGAGGTCTTTTGTGTGTGCCAAGGAAGGTTTTCGTGTGGAGAAGGAGAAGCATTTGGTTGATGGCAGAGTCAAGCGGCCACGTGCCGAAACCCGCGTCGGTTGCAAGGCCATGTTGGTTGTGAAAATTCAAGATTCTGGCAGATGGGTTGTTTCTTCATTTGTCAAAGAACATAATCATGAATTGGTTCCGCCTGACAAGGTGCATTGCCTTCGTTCTCATCGCCATGTTTCGGGTCCAGCTAAGTCATTGATTGATACTTTGCAGAGTGCTGGAATAGGACCTAGTGGAATAATGTCTGCACTAATACAAGAATACGGTGGAATTAGCAATATTGGTTTCACTGAGCGTGACTGTAGGAATTATATGAGAAGTAGTAGGCAAAGGACCCTTGGAGAGTCCATTGAGGAGTTTGAGTCTTGTTGGTCCTGTCTAATTGATAGGTATGATCTCAAGAAACATGAATGGCTCCAAGCAATTTATGGTGATAGGGGGCATTGGGCCCTTAAATATGTTGATGAGGGAGTAACCTCTTCAGAAGTTTATGATGTAGCAATAAGTGCTCTTCGGGAGGCTGCGAATAAAGTGGCATTTGCAACAAAAAATGGTGGAAGACAGGTTATTTTAAACGGAACTTGTGAAGAAGACCTTCATCAGAGCAATGAAGCAACTATAAGACGTAGTGATTCTCCATTTGGTACGCAACAATCTCCATATAAGGATGACCAAGATAGGACAATTGAGAAGTTGACACGGCAACTTGACAGAGCTCGAAGGAAATGTGAAGTTTATAGGTCCAACTTGCTGTCAATTTTAAAAGATATTGAAGAGCAGAAGCTACAATTGTCAGTTAAAGTCCAAAATATTAAGTTGGGAATGAAAGAGTGA 1221 0.4341 MEFEPLSLGNEVIEFDMIGLGYEATIDMEHPIEDDEDLVNIDYSSAAANSVLAAGVGPHIFGGDTNLEPCQGMDFESEEAAKAFYNSYARRVGFSTRVSMSRRSRRDGSIIQRSFVCAKEGFRVEKEKHLVDGRVKRPRAETRVGCKAMLVVKIQDSGRWVVSSFVKEHNHELVPPDKVHCLRSHRHVSGPAKSLIDTLQSAGIGPSGIMSALIQEYGGISNIGFTERDCRNYMRSSRQRTLGESIEEFESCWSCLIDRYDLKKHEWLQAIYGDRGHWALKYVDEGVTSSEVYDVAISALREAANKVAFATKNGGRQVILNGTCEEDLHQSNEATIRRSDSPFGTQQSPYKDDQDRTIEKLTRQLDRARRKCEVYRSNLLSILKDIEEQKLQLSVKVQNIKLGMKE 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00733 406 Coils Coil 351 378 - -
Phco4g00733 406 MobiDBLite consensus disorder prediction 335 355 - -
Phco4g00733 406 Pfam FAR1 DNA-binding domain 84 175 IPR004330 -
Phco4g00733 406 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 51 249 - -
Phco4g00733 406 MobiDBLite consensus disorder prediction 335 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00733 Phco-Chr4 5611882 5615286 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco4g00733 FAR1 2.5e-35 CL0274