Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00692 ATGAAGCATTTTTCTCTTCTGTTACTTGGATTTGGATCTATATATGTTCAACTGTTTTCTCTCTTTATATTAAGCTCACCAAGTGTAGCCTTTGCTTCAGGAAATGAGACTGATCATTTGGCACTTCTCCAATTCAAGAAATCTATATCCAGGGACCCATATGGAGTCTTAGTTTCTTGGAATACTTCAACCCACTTCTGTAACTGGCCTGGAATAACATGCAATCTCAAGCTTCAAAGAGTTACACAGTTAGTCTTGTTAAGGTATATGTTGGAGGGATCCATATCTCCCCACATAGGAAATCTCTCTTATATGATCAACTTCAATCTAGCAACCAACAACATGCATGGGAAAATACCACAGGAAATGGGACGGTTGTCACGTCTGCAACAACTATCTGTCTCAAACAACTTATTGGTAGGAGAAATTCCTACAAACTTGACTGGATGTACTGATCTCAGATTCTTGTACTTACAAAGGAACAATCTAACAGGCAAAATACCAATCGAAGTTGGCTCACTTGGAAAGCTTGAAAGCTTGGGAGTTTCTACTAACAAGTTAACAGGAGAAATCCCTTCATTCATAGGTAATCTTACCTCCCTCACTGTTCTCGATGTCGGAGGAAACAACTTTGAAGGACATATACCACAGGAAATATGCCGGCTCAAAAACTTGACATTTGCATCATTTGGTGTCAACAAGTTCACCGGAACACTTCCTTCTTGTCTTTATAATATGTCATCTCTCACCATGATCTCAGTTACAGAAAATCAATTAACTGGCCATCTTCCACCTAACATGTTCCACACACTCCCCAATCTCCAAGAACTTTACATTGGTGACAATCAAATCTCTGGTCCAATCCCACCATCCATCAGAAATGCAACTATTTACTTCTTAGCACTGGAGGCCAGTCGAAACAGTCTCACGGGACAAATTCCAAGCATGGGAAATTTCCAGTATCTTGATATCGTATCTCTGTCTTGGAACCATCTAGGTGACAATTCAACTAATGATTTCGATTTTCTAGATTCATTGGCTAACTGTAGTAGGTTGAAAACGTTTTCCATATCCTACAATAATTTTGGAGGTCATTTCCCAAATTCTGTGGGAAATTTATCCTCCCAACTTAGTCAATTATATCTTGGAGGTAATCAGATATCAGGAAAAATCCCTGCAACAATAGGAAATTTAATTAACTTAACTCTCTTGACTATGGAAAACAACAGCCTTGGTGGGAATATCCCAACAACTTTTGGGAAGTTTCAAAGATTGCAGAAGTTAAATTTGGGTGCAAACAAGCTGTCAGGAGAGTTAAGAGCCTCCATAGGCAACCTTACTCAATTGTTTCATTTGGAATTAGCAGATAATTTGTTTGAAGGGAATATTCCTCGAAGTATAGGAAACTGCCAGAAGTTACAGTACTTAGACCTTTCATATAACAACTTTACAGGAACCATACCCTCGGACCTTTTTAAGCTTTCATCTCTGACAAAATTGTTGGATTTGTCACTAAACTCATTGAGTGGCAGTGTACCTGAAGAAGTAGGCAGCCTAAAAAATCTTGGTTGCCTAGATATGTCTGAGAATCACATGTCCGGGGAAATTCCTCCAACAATGGGAGAATGCATAATGTTGGAATACCTGTATTTACAAGGGAATTCTTTACAAGGAATCATTCCATCCTCTTTGGCATCACTCAAAGGGCTTCAACGTTTAGACCTGTCACGAAATCAATTGTCTGGATCAATTCCTAATACTCTACAAAGCATTTCTTCCTTACAGTATTTCAATGTATCCTTTAACAAATTGGAGGGTGAAGTACCAACCTTTGGAAATGCAAGTGCGATATTGGATATGGGAAACAATAAACTTTGTGGGGGAACTTCAGAGCTGCATCTACCAACGTGCCCCGTCAAAGGTAAGAAACTTTCAAAACACCACAAGTTCAGGTTGATAGCTGTGATAGTTAGTGTGATTACTTTTCTTCTCATATTGTCAATTACTCTAACTATTTACTGGACAAGGAAAAGGAGTAAGAAAACGTCTTTGGATTCACCAGCAAATGATGATCAGTCGGCTACAGTTTCGTACCAAAGCCTGCACAATGGAACTGATGGGTTCTTAGCTACAAACTTGATAGGGTCTGGAAATTTTAGCTCTGTTTACAAAGGAACTCTTGAGGAGTTAGATGAAAAAGTTGTTGCCATAAAGGTCCTAAACCTTCAGAAAAAGGGAGCTCATAAGAGTTTCATTTCAGAATGCAACGCACTTAGAAATATCAAACATCGAAATCTGATTCAGGTTTTGACATGTTGTTCCAGCATAGATTACAAAGGTCAAGAATTCAAAGCTCTAATTTTTCCCTACATGACAAATGGAAGCTTAGAGCAATGGCTGCATCCTAAGACATTAAGCGAAGAGGATCCGAGAAAATTGAGCCTTGATCAAAGATTAAATATCATGGTCGATGTTGCTTCTGCATTACATTATCTTCATCATGAATGTGAGCAATCAATAATTCATTGTGATTTAAAGCCAAGTAATGTCCTTCTCGACAATGAGATGGTTGCTCATGTGAGTGATTTTGGCATATCAAAACTTCTCTCAGACATCAATGATAACACTTCTAAACAAACAAGTACAATTGGAATAAAGGGTACTCTTGGCTATGTTCCTCCAGAGTATGGAGTGAGTTCTGAAGTATCAACATACGGTGATATATACAGCTTTGGGATTCTTATGTTGGAAATGCTTACAGGAAAAAGTCCCACAGATGAAATGTTTGAAGATGGTCAAAATCTTCATAACTTTGTTCTAACTTCATTTCCTGATAATCTTTTGCAAATTTTGGATCCACTACTTATTCCAACAGATGAATCACCACCTTTGAAAGGAAACAATTGGAATCTTGATCCAAATGTTGAGATGTGCTTAGTGTCCCTTTTTAGGATTGGACTCGCTTGTTCTATGAAATCACCAAAAGATAGAATGAATATTGCTCATGTCACTAGGGAGCTTAACAGAATCAGAGAGGTCTTTCTTGTTGGTGAGTGA 3057 0.3821 MKHFSLLLLGFGSIYVQLFSLFILSSPSVAFASGNETDHLALLQFKKSISRDPYGVLVSWNTSTHFCNWPGITCNLKLQRVTQLVLLRYMLEGSISPHIGNLSYMINFNLATNNMHGKIPQEMGRLSRLQQLSVSNNLLVGEIPTNLTGCTDLRFLYLQRNNLTGKIPIEVGSLGKLESLGVSTNKLTGEIPSFIGNLTSLTVLDVGGNNFEGHIPQEICRLKNLTFASFGVNKFTGTLPSCLYNMSSLTMISVTENQLTGHLPPNMFHTLPNLQELYIGDNQISGPIPPSIRNATIYFLALEASRNSLTGQIPSMGNFQYLDIVSLSWNHLGDNSTNDFDFLDSLANCSRLKTFSISYNNFGGHFPNSVGNLSSQLSQLYLGGNQISGKIPATIGNLINLTLLTMENNSLGGNIPTTFGKFQRLQKLNLGANKLSGELRASIGNLTQLFHLELADNLFEGNIPRSIGNCQKLQYLDLSYNNFTGTIPSDLFKLSSLTKLLDLSLNSLSGSVPEEVGSLKNLGCLDMSENHMSGEIPPTMGECIMLEYLYLQGNSLQGIIPSSLASLKGLQRLDLSRNQLSGSIPNTLQSISSLQYFNVSFNKLEGEVPTFGNASAILDMGNNKLCGGTSELHLPTCPVKGKKLSKHHKFRLIAVIVSVITFLLILSITLTIYWTRKRSKKTSLDSPANDDQSATVSYQSLHNGTDGFLATNLIGSGNFSSVYKGTLEELDEKVVAIKVLNLQKKGAHKSFISECNALRNIKHRNLIQVLTCCSSIDYKGQEFKALIFPYMTNGSLEQWLHPKTLSEEDPRKLSLDQRLNIMVDVASALHYLHHECEQSIIHCDLKPSNVLLDNEMVAHVSDFGISKLLSDINDNTSKQTSTIGIKGTLGYVPPEYGVSSEVSTYGDIYSFGILMLEMLTGKSPTDEMFEDGQNLHNFVLTSFPDNLLQILDPLLIPTDESPPLKGNNWNLDPNVEMCLVSLFRIGLACSMKSPKDRMNIAHVTRELNRIREVFLVGE 1018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00692 1018 Gene3D Transferase(Phosphotransferase) domain 1 791 1014 - -
Phco4g00692 1018 Pfam Leucine rich repeat 233 284 IPR001611 GO:0005515
Phco4g00692 1018 Pfam Leucine rich repeat 546 604 IPR001611 GO:0005515
Phco4g00692 1018 SUPERFAMILY L domain-like 35 332 - -
Phco4g00692 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 341 643 - -
Phco4g00692 1018 SUPERFAMILY L domain-like 375 625 - -
Phco4g00692 1018 SUPERFAMILY Protein kinase-like (PK-like) 686 1007 IPR011009 -
Phco4g00692 1018 Gene3D Ribonuclease Inhibitor 149 228 IPR032675 -
Phco4g00692 1018 FunFam LRR receptor-like serine/threonine-protein kinase EFR 679 790 - -
Phco4g00692 1018 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Phco4g00692 1018 SMART serkin_6 708 1014 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00692 1018 PANTHER OS04G0122200 PROTEIN 221 1011 - -
Phco4g00692 1018 Pfam Leucine Rich repeat 469 485 IPR001611 GO:0005515
Phco4g00692 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 840 852 IPR008271 GO:0004672|GO:0006468
Phco4g00692 1018 Gene3D Ribonuclease Inhibitor 37 148 IPR032675 -
Phco4g00692 1018 Gene3D Ribonuclease Inhibitor 233 332 IPR032675 -
Phco4g00692 1018 Gene3D Ribonuclease Inhibitor 338 638 IPR032675 -
Phco4g00692 1018 Pfam Protein kinase domain 712 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00692 1018 ProSiteProfiles Protein kinase domain profile. 708 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00692 1018 Gene3D Phosphorylase Kinase; domain 1 688 790 - -
Phco4g00692 1018 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 791 1017 - -
Phco4g00692 1018 ProSitePatterns Protein kinases ATP-binding region signature. 714 738 IPR017441 GO:0005524
Phco4g00692 1018 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 75 340 - -
Phco4g00692 1018 SMART LRR_typ_2 126 150 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 198 222 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 446 470 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 519 543 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 246 270 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 567 590 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 398 421 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 471 494 IPR003591 -
Phco4g00692 1018 SMART LRR_typ_2 271 295 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00692 Phco-Chr4 5226195 5229334 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Phco4g00692 Pkinase 8.8e-41 CL0016