Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00671 ATGTTCGGTGGCGGAGGGGAGGACGCGTTGGCGGCACGGCTTGGCATGGTCACGCCGTCGCTGCTAAACCCGGCAACGCCGTTGGTGATGTCCGGAGAGGTGTCGGCGGGGGTGAGGGAGGAGAGGGGACCGGCGCAGCCGCAGTGGAGCCAGCAGGAGACGCGGGAGTTCATAGCGATACGCGCGGAGCTGGAGAGGGACTTCACTGCGTCGAAGCGGAACAAGACGCTTTGGGAAGTGGTGAGTTCGAAGATGAGGGAGAGAGGGTTCAGGAGGAGCCCTGAACAGTGCAAATGCAAGTGGAAGAACCTCGTTAATCGCTATAAGGGAAAAGAGACATCTGACCCAGAGCATTGCAGGCAATGTCCATTTTTTGAAGAATTGCATGCAGTCTTTACCCAAAGGGCACATAATATGCAACGATTACTTCTTGAATCTGAAACTCGCTCAGCTCAAACCAAGAAAGGAGTGAAAAGATCAAGTGGAGACCGATCCTCAGAGGAACTCTCAGAAGATGACGACGAGGTTGAATATGACAGCGAAGAGGAAAAACCTTCTAGAAGCAATACCCGCAAAAAGAAAGTTGACAAAGTTGGAATGGATAAGTCTTCTTCAAGGGCCAACAATTCATCGCATGCTGTCAGTAGTAGTACTAGTAATATTCAGGAAATGCTGAAGGAATTTTTCCAGCACCAGCTAAGGATGGAGATGCAGTGGAGGGAGATGATGGAGAGACGAGCTCATGAAAGACAGTTGTTTGAACAGGAATGGAGGCAGTCGATGGAGAAGCTTGAGCGGGAGAGATTAATTATTGAGCAGGCATGGAGGGAGAGAGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCGGAAAAAAGGGATGCTTTATTGACGACCCTTTTGAACAAACTCATTAATGAATCTACCTAA 930 0.4978 MFGGGGEDALAARLGMVTPSLLNPATPLVMSGEVSAGVREERGPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSSKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHCRQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRSSGDRSSEELSEDDDEVEYDSEEEKPSRSNTRKKKVDKVGMDKSSSRANNSSHAVSSSTSNIQEMLKEFFQHQLRMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLIIEQAWREREEQRRMREESRAEKRDALLTTLLNKLINEST 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00671 309 Coils Coil 254 274 - -
Phco4g00671 309 PANTHER FI21293P1 41 305 - -
Phco4g00671 309 Gene3D - 49 110 - -
Phco4g00671 309 SMART sant 45 107 IPR001005 -
Phco4g00671 309 Pfam Myb/SANT-like DNA-binding domain 47 130 IPR044822 -
Phco4g00671 309 ProSiteProfiles Myb-like domain profile. 49 105 IPR001005 -
Phco4g00671 309 MobiDBLite consensus disorder prediction 144 219 - -
Phco4g00671 309 MobiDBLite consensus disorder prediction 202 219 - -
Phco4g00671 309 MobiDBLite consensus disorder prediction 181 201 - -
Phco4g00671 309 CDD GT1 47 112 - -
Phco4g00671 309 MobiDBLite consensus disorder prediction 151 166 - -
Phco4g00671 309 FunFam Zinc finger and SCAN domain-containing 20 49 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00671 Phco-Chr4 5077017 5078923 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco4g00671 Myb_DNA-bind_4 2e-21 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00671 4 5077017 5078923 Phco4g00671 4 5077017 5078923 ECH