Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00618 ATGGAGAGGTACAACTTAATTAAGGAAGTTGGTGATGGGACGTTTGGGAGTGTCTGGAGAGCTATAAACAAACAAACTGGTGAAGTTGTTGCTATCAAGAAGATGAAGAAGAAGTATTACTCTTGGGAGGAGTGTGTAAACCTAAGAGAAGTCAAGTCATTACGAAAAATGAACCACCCAAATATTGTCAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTTTGTACTTTGTTTTTGAATACATGGAATGCAACCTATACCAGCTTATGAAAGATAGGGAAAAACTGTTTTCTGAAGGTGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGTGACCTGAAGCCTGAAAACTTGCTGGTTACCAAGGATATAATCAAAATTGCTGATTTTGGCCTAGCCCGAGAGATAACTTCACAACCACCCTACACTGAATATGTCTCCACACGATGGTACCGTGCACCTGAAGTGCTGCTTCAGTCTTATATGTATACCTCTAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAGCTTTTCTCTCTTCGTCCCCTTTTCCCAGGTGTCAGTGAACCAGATGAGATATACAAAATATGTGGTGTGATTGGCAGTCCAACCCATGAAACTTGGGATGATGGACTCAAACTTGCAAGGGATATCAACTACCAATTCCCGCCGCTTGCCGGTGTGCATCTTTCTGCACGGATCCCGTCTGCAAGCGAGGATGCAATCAGCCTTATCACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCCGAGGCCCTTCAGCATCCTTTCTTTCAGAGTTGCTTCTATATTCCTCCATCCCTTCGCAGCAGAGCAGTAGCGAGAACTCCACCATCCGCTGGAACCAGAGGAGCACTGGATCAGCAAGGGGTCAAGAGATATTCCGGTGCTTTATCTTATTCGAAGATCACCAATCATTTTTCTTCCCAGAAATTACATCCTCCTTTAGCTTCAGGTGTGCAACGGAAGCTGGATATGGTAAATCAGGATGGAATTAGGAATGAAAAACCTATGAGGAGTACTAAACCAAAGTATCGACAGCCAGGAAAGGACAGCCCAACTTCTATGAACAAGGGGAGGTCTGCACGTGGGGTTTCAGAAACAGCTGAGAAATTGGGCAATCTGTGTGTTAGTGGTAGAAGACAATCAATGGGGCAAGCCCGTCCTCCACCAATGAAAGCTGGAGTGAATTGGATTTCTGAATCTGGAAACTTCATCCTTGGGTCCGCCCAGCAGCAGATTCAGGCTGGAAGAACTTTCACCAGAAAAGTTGCCGGATGA 1356 0.4491 MERYNLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREITSQPPYTEYVSTRWYRAPEVLLQSYMYTSKVDMWAMGAIMAELFSLRPLFPGVSEPDEIYKICGVIGSPTHETWDDGLKLARDINYQFPPLAGVHLSARIPSASEDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRSRAVARTPPSAGTRGALDQQGVKRYSGALSYSKITNHFSSQKLHPPLASGVQRKLDMVNQDGIRNEKPMRSTKPKYRQPGKDSPTSMNKGRSARGVSETAEKLGNLCVSGRRQSMGQARPPPMKAGVNWISESGNFILGSAQQQIQAGRTFTRKVAG 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00618 451 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Phco4g00618 451 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00618 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Phco4g00618 451 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Phco4g00618 451 MobiDBLite consensus disorder prediction 355 371 - -
Phco4g00618 451 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Phco4g00618 451 MobiDBLite consensus disorder prediction 372 387 - -
Phco4g00618 451 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Phco4g00618 451 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00618 451 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Phco4g00618 451 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 334 - -
Phco4g00618 451 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Phco4g00618 451 MobiDBLite consensus disorder prediction 355 394 - -
Phco4g00618 451 CDD STKc_MAK_like 4 283 - -
Phco4g00618 451 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00618 Phco-Chr4 4676010 4680523 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Phco4g00618 Pkinase 1e-75 CL0016