Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00614 ATGAGCGTTCCTCCGCCGTCTACGGCGGCGATGTGGACGCCCTTCACGGCGGCCCAATGGCACGAGCTCGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCGGGGCTCTCCGTTCCCCCTGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAATTCATGGCACACCCATCTCTTGGGGGCTATTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCCGGAGAACCGATGGGAAGAAGTGGAGGTGTTCGAGGGATGCTCACCCTGACTCCAAGTACTGCGACCGCCATATGATTCGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCTCAACCTCACTCTTCTTCAGCTTCTTCAAACCCTGTTGCTGCTTCTGCTTCATCTGCAACTGGTTCTGCTGCTTCCTCTGGAACTGCTTCTGCTGCTGCATCTGCTACAACACTCAACACCCTTCCCTTGCATACCAATGGTGCCCGGGAGGGTTTCACTTTCACCCTTGGGAACAGTGCCACCTCCGCGACCCCCACCCTCCCCCACCTTCACATGGACCCCCTCACTCTTTCAGGTGACAACACCAAGAAAACTTACAGGTTTGGACTGAACTCAGAAGCTGATGACCACGTCTTACAGAAAGATCTGGGAAGTGTGAGGTATCAAGGTTATGACTTCACCTCAGACAGCATGTGGTCTCATATGTCTCCAATTCCATCAAATACTGTTTCGGAATCAAGAAGTGGTTCTACCATGCTGGGCAACTGCTTCCAACAGCAAACAATGCGAGATGCCGAGCTGTTGAACCTGGAAACTGCAAGAACCAAAGACCTTATCTTTAGTAGCCAGTTAAGTTCATCAGGGAGTTTGAAACAGGAATATCAGTCTCCTCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCCATGGAGTATAGACCCAACAAGGATTTTAACTACAATCCAGATGTCAATGTTGATTAA 996 0.512 MSVPPPSTAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQFMAHPSLGGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESQPHSSSASSNPVAASASSATGSAASSGTASAAASATTLNTLPLHTNGAREGFTFTLGNSATSATPTLPHLHMDPLTLSGDNTKKTYRFGLNSEADDHVLQKDLGSVRYQGYDFTSDSMWSHMSPIPSNTVSESRSGSTMLGNCFQQQTMRDAELLNLETARTKDLIFSSQLSSSGSLKQEYQSPQSLFSDWDWKKDLSSSAMEYRPNKDFNYNPDVNVD 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00614 331 PANTHER GROWTH-REGULATING FACTOR 5 13 312 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phco4g00614 331 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco4g00614 331 MobiDBLite consensus disorder prediction 111 137 - -
Phco4g00614 331 Pfam WRC 69 111 IPR014977 -
Phco4g00614 331 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco4g00614 331 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
Phco4g00614 331 MobiDBLite consensus disorder prediction 68 137 - -
Phco4g00614 331 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco4g00614 331 MobiDBLite consensus disorder prediction 68 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00614 Phco-Chr4 4646566 4649490 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phco4g00614 WRC 2.4e-19 No_clan