Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00536 ATGGAGCTTTTCCCAGCACAACCAGACTTGTCCTTACAAATCAGCCCTCCAAACACCAAACCAACATCAAGCTGGAGGAGAAGCACCGAAGAAGACATGGATTTGGGGTTTTGGAAGAGAGCCTTGGACTCAAGAAACTCCATATCATCAATGGCCAAACAAGACTCTTGCGTCGCCCTCTCCCTCTCCAATCCAAAAGCCTCAGATAACTCCAACTCCTCTAACCTCATTCACCACTTCCAAAACGTTGCCAATAATGCCACTACCAACACCTTCCAACCCTTTCAGCAGAACCATTACTTCCACCAGCCACTGTTCCAGCCTCAGCACCAAACCTTAAGCCAAGACCTCGGCTTTCTCAGACCCATTAGAGGAATCCCAGTGTACCAAAACCCTCCTCCTATACCATTCACTCAGCACCACCACCACCATCATCTCCCTCTAGAGGCTTCAACCACCACCCCTTCTTCTATTATTTCCAGCACAAACACTGGTTCTACCCCTTTCCACTCTCAGGCCCTTATGAGATCAAGGTTCTTGTCACGCTTCCCTGCTAAGCGTAGCATGAGGGCTCCGAGGATGCGTTGGACTTCCACCCTTCATGCTCGCTTTGTTCATGCCGTTGAACTCTTAGGTGGCCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCACATGTGAAGTCTCATTTACAGATGTACCGGACGGTGAAGACTACGGATAGAGCCGCGGCTTCATCAGGGCAATCGGATGTGTATGATAATGGGTCGTCTGGAGATACTTCTGATGACTTAATGTTTGATATAAAATCTTCTACAAGGTCTGATGTATCCATTAAACAGGGAAGATCAAGTGTTAATCAAGATAAGGAATATCATGGTCTTTGGGGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGACAAAGACTGATTCTGTTGGAAACGTGCCTTCTCTTGAGAAGGAAATGGATCCGAAGTGTCTAAGCTATGAGAGAATATCAGATGGAAGCTCATCCTCAAATGTTTCAGGATCAAGCCAGAAGAAGCCTAATTTGGATTTGGAATTCAGCTTGGGGCAGCCACTTTAA 1119 0.4674 MELFPAQPDLSLQISPPNTKPTSSWRRSTEEDMDLGFWKRALDSRNSISSMAKQDSCVALSLSNPKASDNSNSSNLIHHFQNVANNATTNTFQPFQQNHYFHQPLFQPQHQTLSQDLGFLRPIRGIPVYQNPPPIPFTQHHHHHHLPLEASTTTPSSIISSTNTGSTPFHSQALMRSRFLSRFPAKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSDDLMFDIKSSTRSDVSIKQGRSSVNQDKEYHGLWGNSSREAWLHGKTKTDSVGNVPSLEKEMDPKCLSYERISDGSSSSNVSGSSQKKPNLDLEFSLGQPL 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00536 372 FunFam Myb family transcription factor 190 248 - -
Phco4g00536 372 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 371 IPR044847 GO:0000976|GO:0006355|GO:0010158
Phco4g00536 372 NCBIfam myb-like DNA-binding domain, SHAQKYF class 192 245 IPR006447 GO:0003677
Phco4g00536 372 MobiDBLite consensus disorder prediction 250 275 - -
Phco4g00536 372 SUPERFAMILY Homeodomain-like 189 245 IPR009057 -
Phco4g00536 372 MobiDBLite consensus disorder prediction 1 29 - -
Phco4g00536 372 Gene3D - 191 248 - -
Phco4g00536 372 MobiDBLite consensus disorder prediction 340 372 - -
Phco4g00536 372 MobiDBLite consensus disorder prediction 342 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00536 Phco-Chr4 3859488 3863801 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco4g00536 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00536 4 3859488 3863801 Phco4g00536 4 3859488 3863801 ECH
Phco4g00536 4 3859488 3863801 Phco8g00180 8 1593428 1598002 PCT