Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00524 ATGACATTGGTTATCAGAGAGAGAAGACACAAGCAAGCTCTAAGGCTTTCATTACCGAAATCACCTTCAATTCCATCACATTCAGATTTCCCTCACCAAATTCACGTACCAGCAGTGCTCACATCCCCGTCTTCCCATGTAGACTCTTCTCCAGGCATTATCAAGGACCTTTCGGACCTTGAGAAGCTTGCAGTTCTTGGCCATGGCAATGGTGGCACAGTCTACAAAGTTTATCACAATAGTAGCCGCTCCTTCTATGCCTTGAAAGCGCTACGCTTGAATGAGAATGATCTTGGCATTCGCCAACCCGCTACACTAGAGGCTGAGATTCTAAAGCGAGTGGATTCACCATATATAGTAAGGTGTCATGCAGTTTTTGACAATGGCAATAGCAATAAGAATGATGGTGACAAGGGAGGTGACATAAGCTTTGTTATGGAATACATGGAAGGAGGGTCGTTGCATGATGTGTTGAGAGACCATCATAGACTGCCAGAAGAGGTTATCTCGGTTTTGGCTAGGCGTGTTTTGGAAGGACTTGGCTATCTACATAGCATGAACATTGTGCATAGAGATATTAAACCATCAAACTTACTTGTGAATGATAAAGGGGAGGTAAAGATTGCAGATTTTGGAGTGAGTCATGTGGTGGAAGGTAGGTTTGAAGGAAATGAGTATGATGCAGGCACTTGTGCTTACATGAGTCCAGAAAGGATTGATCCAGAAAGATGGGGTGGTGAAAATGCAGATGAGTTTGCAGGAGATGTGTGGTCAATGGGAGTAGTAATGTTGGAATGTCTTTTGGGTTATTTTCCATTGATTGGTCCAGGGCAGAGACCAGATTGGGCAACTTTGATGTGTGCAATTTGCTTTGGTGAGAAGTTGGAGATGCCAGAAAAAGCATCTCCAGAGTTTCAAAATTTTGTGAGGAGATGTCTTGAGAAGAATTGGAGGAAGAGAGCAACAGTATTAGAACTTCTCCACCACCCTTTTGTCAGTCCAAAAATTCGTTGCTCTTAG 1020 0.4333 MTLVIRERRHKQALRLSLPKSPSIPSHSDFPHQIHVPAVLTSPSSHVDSSPGIIKDLSDLEKLAVLGHGNGGTVYKVYHNSSRSFYALKALRLNENDLGIRQPATLEAEILKRVDSPYIVRCHAVFDNGNSNKNDGDKGGDISFVMEYMEGGSLHDVLRDHHRLPEEVISVLARRVLEGLGYLHSMNIVHRDIKPSNLLVNDKGEVKIADFGVSHVVEGRFEGNEYDAGTCAYMSPERIDPERWGGENADEFAGDVWSMGVVMLECLLGYFPLIGPGQRPDWATLMCAICFGEKLEMPEKASPEFQNFVRRCLEKNWRKRATVLELLHHPFVSPKIRCS 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00524 339 PRINTS Tyrosine kinase catalytic domain signature 146 159 IPR001245 GO:0004672|GO:0006468
Phco4g00524 339 PRINTS Tyrosine kinase catalytic domain signature 254 276 IPR001245 GO:0004672|GO:0006468
Phco4g00524 339 PRINTS Tyrosine kinase catalytic domain signature 182 200 IPR001245 GO:0004672|GO:0006468
Phco4g00524 339 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 19 333 - -
Phco4g00524 339 ProSiteProfiles Protein kinase domain profile. 60 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00524 339 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Phco4g00524 339 CDD PKc_MAPKK_plant_like 58 332 - -
Phco4g00524 339 Pfam Protein kinase domain 61 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00524 339 Gene3D Phosphorylase Kinase; domain 1 44 146 - -
Phco4g00524 339 SUPERFAMILY Protein kinase-like (PK-like) 35 334 IPR011009 -
Phco4g00524 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Phco4g00524 339 FunFam Mitogen-activated protein kinase kinase 1 40 150 - -
Phco4g00524 339 Gene3D Transferase(Phosphotransferase) domain 1 147 338 - -
Phco4g00524 339 SMART serkin_6 60 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00524 Phco-Chr4 3775922 3776941 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Phco4g00524 Pkinase 6.5e-61 CL0016