Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00508 ATGGCAATTGAAAACCATGACACCACTGTCAGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGCCCTGATGATGAGGACAATAGGTGGCCACCATGGTTGAAGCCACTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTCACATGCTGATTCTCACAAGAGTGAATGCAACATGTATTGCTTGGACTGTATGAACGGCCCACTCTGCTCTCTCTGCCTCGCCCACCACAAGGATCACCGTGCAATCCAGATTAGGAGGTCCTCATACCATGATGTTATCAGAGTTTCTGAGATTCAGAAGGTGTTGGACATCACTGGCGTCCAAACCTACATTATCAACAGCGCAAGGGTTGTGTTTTTGAACGAGAGGCCTCAGCCAAGGCCAGGAAAAGGGGTCACAAACACTTGTGAAGTCTGCGAGCGAAGTCTTCTTGATTCTTACCGCTTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTACGAGCCCCCAGAAGAAGAAGCGGTCAACGGCAATGTCATCAGATTCTGAGGATTCATACAGCAGCAACAGCGTCCATGGCCTGCAGAAAAACTGCAAAGTTCAGAGCTTCACACCATCCACACCACCTCCTACTTCGGTTAATTACAGAACTGCCAAGAGAAGAAAGGGAATACCACACCGAGCCCCAATGGGGGGACTAATCATAGAATATTAG 708 0.4802 MAIENHDTTVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKSHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSTSPQKKKRSTAMSSDSEDSYSSNSVHGLQKNCKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00508 235 MobiDBLite consensus disorder prediction 164 224 - -
Phco4g00508 235 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 228 - -
Phco4g00508 235 MobiDBLite consensus disorder prediction 164 212 - -
Phco4g00508 235 Pfam PLATZ transcription factor 89 160 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00508 Phco-Chr4 3615905 3617597 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco4g00508 PLATZ 7.2e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00508 4 3615905 3617597 Phco4g00508 4 3615905 3617597 ECH
Phco4g00508 4 3615905 3617597 Phco8g00154 8 1371677 1373714 PCT