Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00472 ATGAAGGCAGAAGAAGACGAAGGAGTGATTATGATGGAATTACTAGAAATTTGGGTATTGAGACTGGTTGTGGCAAGTGCTGTTTGTCTGCATATATTTATCAGATCAGTTTCTGGCTCTGCAACTGAAGGGTTTGAAAACATAGCATGTTGTGCTGATTCAAATTACACAGATCCACAGACCACCTTAAATTACACAACAGATTACTCATGGTTCCCTGACAGAGGAAGCTGCAGAAGACCTAAAATTGGGTTGAATGAAAAAGTTCGACTGTTTTCTATAGACGAAGGAAAGAGATGTTACAATTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCGCATTTCCATTTGACAGTGTAAATTCTTCCTTTAATGTTTCAATTGGGGTAACACAATTAGGTGCAGTGAGACCATCCACGCCCCGGGACTTTGAGATTGAGGGAGTTTTTAGGGCTACCAAAGACTACATAGACTTCTGCTTAGTGAAGGGGGAGGTGGATCCCTTTATTTCTCGGCTGGAATTAAGGCCATTGCCTGAAGATTACCTCTTACATGATTTGCCTGCCAGTGTTTTAAAATTGATAAGCAGAAATAGTCTTTGGGGCACAAAAGATGAAATCAGGTTCCCAAATGACCCAAGTGATAGAATGTGGAAAGCAACTTCAAGTCCATCATCTGCTCTCCTATTGTCTTACAATGTTAGCAATTTTGACCTCAAGTCCAACATGACACCACCTCTACAAGTCCTACAAACTTCTCTTACCCACCCTGAGAGATTGGAGATCCACAGTAGCCTTGACGCTGAGGATTATGAATATCGTGTATTTCTCTACTTCCTTGAATTAAATAGCACTGTCAAAGAAGGAAAAAGGGTGTTTGACATCTATGTTAATGGTGAGATTCAAAGGGAGAAATTTGACATATTGGCTAGAGGGTCCAACTATACATACACTGTCTTGAACGTTTCAGCAAATGGTTCACTTAATTTAACCTTGGTCAAGGCATCTGGTGCTGAGTTTGGACCCCTTTTGAATGCTTATGAGATCATGCAAATGCGATCATGGATGGAAGAGACCAACCAAAAAGATGTGGAAGTGATTCAGAAGATTAGAGAAGAATTGTTGTTGCAAAACCAAAACAAAAAAGTGCTAGAGAGTTGGACTGGAGACCCTTGTATTTTCCCCTGGCACGGAATAGAGTGTGATGGTTCAAATGGCTCGTCTGTTATCACCAAGCTGGATCTTTCCTCAAGTAATTTCAAAGGACCAATTCCTTCTACTGTTACTGAGATGACCAACTTAAAAATACTGAACCTGAGCCACAACAATTTCAATGGTTATATTCCCTCGTTTCCACCGTCCTCCTTGTTGACATCAATAGATCTAAGCTACAATGATCTTATGGGGTCACTTCCGGAATCAATTGTCTCACTGCCATATTTGAAATCTTTGTATTTTGGCTGCAACAAACGCATGAGCGAATACACTCCAGCTAATTTGAATGGTTCACTGATCAATACAGATTACGGAAGATGCAAAGCAAAAGAACCTAGATTTGGACAAGTATTTGTCATTGGTGCTATTACATGTGGATCACTTTTGATCACATTGGCAGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCGATGGGAAGGATTTGGTGGAAAGAACTACTTAATGGAAACAAATGTAATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAAACATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGGTACAAAACATTGATAGGGGAAGGAGGATTTGGTTCTGTTTACCGGGGCACTCTAAATGATGATCAAGAAGTGGCAGTGAAAGTCCGTTCAGCCACATCAACGCAGGGAACTCGAGAATTTGATAATGAGCTAAACCTACTTTCTGCAATACAGCATGAAAACCTAGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTCGTGTATCCTTTCATGTCCAATGGTTCTTTGCAAGATAGACTCTATGGGGAACCTGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATTGCTCTTGGTGCAGCTCGAGGTTTGGCATATCTTCATACATTTCCAGGACGTTCAGTAATACATAGGGACGTAAAATCAAGCAATATACTTCTAGATCATAGCATGTGCGCTAAGGTTGCAGATTTTGGTTTCTCAAAATATGCTCCTCAAGAAGGAGACAGTAACGTTTCTCTTGAAGTCAGAGGAACTGCAGGGTACCTGGATCCTGAATACTACAAAACCCAACAATTATCTGAGAAGAGTGATGTCTTCAGCTATGGCGTGGTTTTACTTGAAATTGTGACTGGTAGGGAACCTCTTGACATAAAGAGACCACGGAATGAGTGGAGCTTGGTTGAATGGGCTAAGCCATATATAAGAGCATCAAAGATGGAAGAAATTGTGGATCCTGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAGTGTCTTGAACCATCCTCAGCATATAGACCAAACATGGTGGACATTGTCCGTGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCTTCAGAATACATGAAGTCCATTGACAGCCTTGGAGGATCCAACCGCTACTCTATTGTCATAGAGAAAAGGGTGCTGCCCTCAACTTCATCAACAGCAGAATCAACCATCACCACACAAGCCTTGTCCCATCCACAGCCGAGATAG 2790 0.4086 MKAEEDEGVIMMELLEIWVLRLVVASAVCLHIFIRSVSGSATEGFENIACCADSNYTDPQTTLNYTTDYSWFPDRGSCRRPKIGLNEKVRLFSIDEGKRCYNLPTIKNKVYLIRGAFPFDSVNSSFNVSIGVTQLGAVRPSTPRDFEIEGVFRATKDYIDFCLVKGEVDPFISRLELRPLPEDYLLHDLPASVLKLISRNSLWGTKDEIRFPNDPSDRMWKATSSPSSALLLSYNVSNFDLKSNMTPPLQVLQTSLTHPERLEIHSSLDAEDYEYRVFLYFLELNSTVKEGKRVFDIYVNGEIQREKFDILARGSNYTYTVLNVSANGSLNLTLVKASGAEFGPLLNAYEIMQMRSWMEETNQKDVEVIQKIREELLLQNQNKKVLESWTGDPCIFPWHGIECDGSNGSSVITKLDLSSSNFKGPIPSTVTEMTNLKILNLSHNNFNGYIPSFPPSSLLTSIDLSYNDLMGSLPESIVSLPYLKSLYFGCNKRMSEYTPANLNGSLINTDYGRCKAKEPRFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIRWEGFGGKNYLMETNVIFSLPSKDDFLIKSVSIQTFTLEDIEVATERYKTLIGEGGFGSVYRGTLNDDQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSYGVVLLEIVTGREPLDIKRPRNEWSLVEWAKPYIRASKMEEIVDPGIKGGYHAEAMWRVVEVALQCLEPSSAYRPNMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALSHPQPR 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00472 929 Gene3D Phosphorylase Kinase; domain 1 572 675 - -
Phco4g00472 929 ProSitePatterns Protein kinases ATP-binding region signature. 606 628 IPR017441 GO:0005524
Phco4g00472 929 Pfam Protein tyrosine and serine/threonine kinase 604 872 IPR001245 GO:0004672|GO:0006468
Phco4g00472 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 722 734 IPR008271 GO:0004672|GO:0006468
Phco4g00472 929 ProSiteProfiles Protein kinase domain profile. 600 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00472 929 Gene3D - 204 355 - -
Phco4g00472 929 Pfam Malectin-like domain 52 353 IPR024788 -
Phco4g00472 929 SUPERFAMILY Protein kinase-like (PK-like) 581 872 IPR011009 -
Phco4g00472 929 SMART serkin_6 600 877 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00472 929 Gene3D Ribonuclease Inhibitor 362 512 IPR032675 -
Phco4g00472 929 FunFam Leucine-rich repeat receptor-like kinase 364 495 - -
Phco4g00472 929 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 676 892 - -
Phco4g00472 929 SUPERFAMILY L domain-like 383 495 - -
Phco4g00472 929 Pfam Leucine rich repeat 412 469 IPR001611 GO:0005515
Phco4g00472 929 Gene3D Transferase(Phosphotransferase) domain 1 676 889 - -
Phco4g00472 929 FunFam Nodulation receptor kinase 565 675 - -
Phco4g00472 929 PANTHER OS07G0107800 PROTEIN-RELATED 48 876 - -
Phco4g00472 929 CDD STKc_IRAK 606 873 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00472 Phco-Chr4 3300008 3309588 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Phco4g00472 Malectin_like 2.3e-44 CL0202