Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00346 ATGGAACCAGAGGCTACGACTATGGTGACAGGAGATGAAGTGCAAAAGCAGCAAGAAGGGTCGCAACTGCCAAGTCTGAGGGAGAGTATAGACAAGCATGAAAGTTTGTCTAGCAAAGGGGATAATGAGCCAAACTCTGTTTCAGAGTGTGAAATCCATTGGGAAGAACTTCAATTAAGAGAGCAGATTGGACAAGGTTCTTATGCAATAGTTTATCATGGAATTTGGAATGGATCGGATGTTGCAGCCAAGGTTTATTTTGGGAACGGATACACAGAGGAGACTTTACAAGACTATAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTACTTTTCATGGGAGCAGTATATTCACCGGAAAGGCTTGCCATTGTTACCGAGTTATTACCTAGGGGAAGCCTTTTCAAAAATCTACATAGGAACAATCAGACATTAGACATCAGAAGACGTCTAAGGATGGCTCTTGATGTAGCTAAAGGAATGAATTATCTTCATCACAGAAATCCACCAATTGTGCATAGAGATCTGAAGTCTTCCAACCTGCTTGTAGATAAAAACTGGACTGTAAAGGTTGGAGATTTTGGCCTGTCTAGGTTGAAGGATGCAACATTATTGAATACGAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAAGTCCTTAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCATTCGATTCCGTGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTCGTAGGCTTTGTGGACAGGCGACTGGACCTTCCGGATGACCTTGATCCCTATGTTGCCTCAATCATCAATGATTGCTGGCGAAGTGATCCAGAGCAACGCCCATCATTTGAAGAGCTGATCCAGAGAACGTTATTCCTTGTCAACAGAGTAACAGCAGTGTCAATTAGGAGAATTGCAGAATCCTAA 984 0.4217 MEPEATTMVTGDEVQKQQEGSQLPSLRESIDKHESLSSKGDNEPNSVSECEIHWEELQLREQIGQGSYAIVYHGIWNGSDVAAKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSPERLAIVTELLPRGSLFKNLHRNNQTLDIRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLNTKSGRGTPQWMAPEVLRNEPSNEKSDVFSFGVILWELMTHSIPWKNLNSLQVVGVVGFVDRRLDLPDDLDPYVASIINDCWRSDPEQRPSFEELIQRTLFLVNRVTAVSIRRIAES 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00346 327 ProSiteProfiles Protein kinase domain profile. 57 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00346 327 Pfam Protein tyrosine and serine/threonine kinase 57 307 IPR001245 GO:0004672|GO:0006468
Phco4g00346 327 ProSitePatterns Protein kinases ATP-binding region signature. 63 84 IPR017441 GO:0005524
Phco4g00346 327 MobiDBLite consensus disorder prediction 10 25 - -
Phco4g00346 327 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 38 310 - -
Phco4g00346 327 PRINTS Tyrosine kinase catalytic domain signature 170 188 IPR001245 GO:0004672|GO:0006468
Phco4g00346 327 PRINTS Tyrosine kinase catalytic domain signature 236 258 IPR001245 GO:0004672|GO:0006468
Phco4g00346 327 PRINTS Tyrosine kinase catalytic domain signature 280 302 IPR001245 GO:0004672|GO:0006468
Phco4g00346 327 PRINTS Tyrosine kinase catalytic domain signature 217 227 IPR001245 GO:0004672|GO:0006468
Phco4g00346 327 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Phco4g00346 327 Gene3D Phosphorylase Kinase; domain 1 50 134 - -
Phco4g00346 327 SUPERFAMILY Protein kinase-like (PK-like) 44 316 IPR011009 -
Phco4g00346 327 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Phco4g00346 327 FunFam Serine/threonine-protein kinase isoform 1 48 135 - -
Phco4g00346 327 CDD STKc_MAP3K-like 63 308 - -
Phco4g00346 327 PIRSF ILK 16 320 - -
Phco4g00346 327 Gene3D Transferase(Phosphotransferase) domain 1 136 318 - -
Phco4g00346 327 MobiDBLite consensus disorder prediction 1 47 - -
Phco4g00346 327 SMART serkin_6 57 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00346 327 FunFam PAS domain-containing protein tyrosine kinase family protein 135 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00346 Phco-Chr4 2212269 2215316 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Phco4g00346 PK_Tyr_Ser-Thr 1.4e-66 CL0016