Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00304 ATGTCTTCTGATCTCTATACTTTTGACATTCCTTTCCCCAGACATTCAGACACAGACAACATGGTCTCCTATGATGCAGATGGAAATCTTATGTTTTTATCTGACCCTTATTCCTTCCCTTTCCTCACTGCCTCTCCAGTGCATGATGTGGCTCAAGGGAACCCTTCTTTCTTCTCTTTTTCTCCCCAGGAAAAGGAGAGTCTCTGTCATGCTAACCCGGTGCAGCCTCTGTCAAATGACTCAAATATAAAGTCTGAGTTTAGAAGTTTCTCTGCTTTGCATGGCTCCGAAGTGACAAGTGAGGAGTGCCAAATGGTTGTGGATTACTTCCGCAATCACCACTTTCTTTCTCAAACTTGTCATGCGTCTGGCAGTGCATCGAAGGTAATACAAAGGAGCTTCAGCTGTAACTCTTTTGGTGGGAAGCCAGATTTCCCCTTTGAACCTCACCCTGACACTCTCATGGACTCCCCAAATTTTCAATGCCATGCTCTGCTTTCCCCTGAAAACAATTTCTTCATGGGACAAATGAGGAGGGTGTGCAGTACAGGAGATTTACAGAACACCAAAGCAACAGATATGTCTCAAGTGGAGAGCCCCTTGTTGGAGGAAGCATACTTCAAAGTGGGGCGTTACAGTGCCGAAGAAAGAAAAGAAAAAATCTCCAAATACAGAGCGAAGAGAAGCCAGAGGAAGTTCAACAAGATTATTAAGTATGCATGCCGAAAGACGCTAGCCGACAATCGAACCCGCATACGTGGCAGATTCGCTCGCAACGACGAAATCAGCGAGATTCCGAAAGCACTTTCTTCAACTTCAACCACAGAAGAATATGAAGACGAATTCTGGGTTGAATTCATTGAAGGATTAAACGAGGAGGTGATCGGTTAG 891 0.4478 MSSDLYTFDIPFPRHSDTDNMVSYDADGNLMFLSDPYSFPFLTASPVHDVAQGNPSFFSFSPQEKESLCHANPVQPLSNDSNIKSEFRSFSALHGSEVTSEECQMVVDYFRNHHFLSQTCHASGSASKVIQRSFSCNSFGGKPDFPFEPHPDTLMDSPNFQCHALLSPENNFFMGQMRRVCSTGDLQNTKATDMSQVESPLLEEAYFKVGRYSAEERKEKISKYRAKRSQRKFNKIIKYACRKTLADNRTRIRGRFARNDEISEIPKALSSTSTTEEYEDEFWVEFIEGLNEEVIG 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00304 296 Pfam CCT motif 217 259 IPR010402 GO:0005515
Phco4g00304 296 ProSiteProfiles CCT domain profile. 217 259 IPR010402 GO:0005515
Phco4g00304 296 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 48 268 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00304 Phco-Chr4 1926760 1928160 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Phco4g00304 CCT 1.2e-15 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00304 4 1926760 1928160 Phco4g00304 4 1926760 1928160 ECH
Phco4g00304 4 1926760 1928160 Phco4g03314 4 53656600 53658300 PCT