Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco4g00289 | ATGAGGAGTTCACATGAGGGATTTTCACAAGCAATAAGCAGAAAGAGAGAGAGAGAGAGAGAGAGATTTGGGATTTGCAGTGCGTGGTTGAATGTTAATTTGAAGATGAATAGCAAAGGCAAAGAGGAAGAGGGGATTAAGAGGGTTATGATTCACGGCGGTCGATACGTGCAATACAACGTTTATGGAAACTTGTTCGAGCTACCCTCCAAGTATGTCCCTCCGATTCGCCCCATCGGAAGGGGCGCATACGGCATCGTTTGTGCTGCTGTTAATTGCGATACGCACGAGGAAGTTGCCATCAAAAAGATTGGTAACGCCTTTGACAACATCATTGACGCTAAACGGACTTTGAGGGAGATTAAGCTCCTTCGCCACATGGACCATGAAAATATAATTGCTATTAGGGATATCATACGACCTCCCAGAAAGGATGCCTTCAAGGATGTTTACATTGTTTATGAATTGATGGACACTGACCTTCACCACATTATTCGTTCTGACCAACCTCTTAACGATGACCACTGTCAGTACTTTTTATATCAGCTGTTACGGGGGCTGAAATATGTGCATTCTGCTAATGTCTTGCACCGAGATCTTAAGCCCAGTAATTTGCTTCTGAATGCGAACTGTGACCTTAAAATTGCTGACTTTGGTTTGGCAAGGATAACATCTGAAACGGATTTCATGACGGAGTATGTGGTCACCCGGTGGTACCGTGCCCCGGAATTGCTCCTTACTTGTTCGGAGTACACCTCTGCTATTGACGTCTGGTCTGTTGGTTGCATATTTGGGGAAGTTATGACCAGGGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAACTAATGCTTATAACGGAGTTATTAGGTTCACCAGATGGTGCCAGTCTTGAATTTCTTCGAAGTGAAAATGCTAAAAGATATATTCGACAGCTTCCCCCTCGTAGGAAGCAAAATTTCTCGGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATTTACTAGAGAAGATGCTTATCTTTGATCCCAACAAACGCATTACAGTTGATGAAGCACTATGTCACCCATATCTTTCATCACTTCATGACATCAATGATGAACCGGTTGGTCCTGGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAAGGAATCAGTGAAATACAATCCTGATCCACCCAGTCAGTAA | 1224 | 0.4355 | MRSSHEGFSQAISRKRERERERFGICSAWLNVNLKMNSKGKEEEGIKRVMIHGGRYVQYNVYGNLFELPSKYVPPIRPIGRGAYGIVCAAVNCDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIRDIIRPPRKDAFKDVYIVYELMDTDLHHIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARITSETDFMTEYVVTRWYRAPELLLTCSEYTSAIDVWSVGCIFGEVMTREPLFPGKDYVHQLMLITELLGSPDGASLEFLRSENAKRYIRQLPPRRKQNFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWKESVKYNPDPPSQ | 407 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco4g00289 | 407 | FunFam | Mitogen-activated protein kinase | 58 | 166 | - | - | |
| Phco4g00289 | 407 | SMART | serkin_6 | 73 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco4g00289 | 407 | Gene3D | Phosphorylase Kinase; domain 1 | 56 | 396 | - | - | |
| Phco4g00289 | 407 | CDD | STKc_TEY_MAPK | 66 | 402 | - | - | |
| Phco4g00289 | 407 | Pfam | Protein kinase domain | 77 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco4g00289 | 407 | Gene3D | Transferase(Phosphotransferase) domain 1 | 157 | 386 | - | - | |
| Phco4g00289 | 407 | SUPERFAMILY | Protein kinase-like (PK-like) | 76 | 367 | IPR011009 | - | |
| Phco4g00289 | 407 | FunFam | Mitogen-activated protein kinase | 157 | 386 | - | - | |
| Phco4g00289 | 407 | ProSitePatterns | MAP kinase signature. | 108 | 211 | IPR003527 | GO:0004707|GO:0005524|GO:0006468 | |
| Phco4g00289 | 407 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 195 | 207 | IPR008271 | GO:0004672|GO:0006468 | |
| Phco4g00289 | 407 | ProSiteProfiles | Protein kinase domain profile. | 73 | 359 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
| Phco4g00289 | 407 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 71 | 360 | - | - | |
| Phco4g00289 | 407 | ProSitePatterns | Protein kinases ATP-binding region signature. | 79 | 103 | IPR017441 | GO:0005524 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco4g00289 | Phco-Chr4 | 1844916 | 1847477 | Dispersed/Wgd |
Transcription factors information