Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00254 ATGGATTCATTTTTCGCATGCTTACGTTACGTTCTTCCCAATTCCTATTGTTTGAACGTTACGTTACGTTGTTTTTGTAGATTTCGAATTGAAGGTGCCGGAATGGAACAGTTCCGGCATATCGGAGAGGTGTTAGGGAGTCTGAAAGCGCTTATGGTTCTGCGAGATGAAATCCAAATCAACCAACGGCAATGCTGTTTGATCCTGGAAATATTCAGTTTGGCGATGGACACGATCGCTGAGGAGATACGGCAGAACCTGAAGCTGGAAGAGAGGAACAGCAAATGGAAGCCTCTGGAATTTCCTCTGAGTGAGTTATGCAGGGTTTTCAAAGAGGGAGAGCATTACATAAAGCAGTGTTTGGATTCCAAAGGTTGGTTGGGGAAAGCCGTCACCCTCTCTCACCACCGAGACTGCGTGGAGTTCCACATCCACAACCTTCTCTGCTATTTCCCGGCGGTGATCGAGGCGATCGAGATTGCAGGGGAGGTTTCAGGTTTGCATCCGGAGGAGAAGGCAAAGAAGAAGGTGATACTGGATCGGAAGTATGACGTGGAGTGGAACGACCCGGAGCTGTTCCAATGGAGGTTCGGGAAGCAGTACCTGGTTCCGCGCGGGATTTGCAAGAAGTTGGAGAACGCGTGGAGGGAGGACAGGTGGAGGCTCATAGAGGCCATCAAGGACAAGACTCCGAAGGAGGGTGGTTCTGGTGCGTTTAGGAAGAGCGATCGTGGCCTCGCCGATATGCTCCTCAAGAAGCTTCTTAATGGGTCGGAGATCAGCCCAATTGCGGTGCTTGTCGGATCCAAAGATTACCAGGTGAGACGCCGGTTGGCCCGCCTGAGGGACTTCAAGGAAATTCAATGGCTGGGGCAGAGTTTCGCGTTGAGGAACTTTCAAGGGGAGAGAGAAGCGCACCAGGCTGAGGTCTCCTCTCTGCTCTCTCTTTCGCACCCCAACATAGTGCAATACCTTTGCGGGTTTTACGACGAGGAGAAGCAAGAGTTCTCTCTTGTGATGGAGTTGATGAAAAAGGATTTGTGGACTTACATGAGAGAGAATTGTGGTCCCAGGAGGCAGATTCTATTCTCTGTCCCTGTTGTGGTGGATCTCATGCTTCAGATGGCCAGAGGCATGGAGTACCTGCATTCCCAAAACATTTCTCATGGACAACTTAACCCCTATAATATTCACCTCAAGCCAAGGAACTCCCAAGAGGGTTATTTTCAGGCAAAGGTTGCAGGCTTTGCCTTGTCTTCTGTCAACAATGGTAGTGCTGACACTAGTGCCATTCATGACTTTAGTCCTTTCACTTGGTATGCTCCTGAAGTTCTAACCCGGTTGGAACAAACGCAGAATCACCGCTCTTCTTCTACAGAGAAAGCCGATGCCTATAGCTTTGGGATGATATGCTTCGAGTTGTTGACAGGGAAAGTGCCTTTTGAAGAAAACCACTTTCAAGGAGACAGAATGATCCAAAACATCGAAGTCGGTGAGAGACCTTTGTTTCCTTACCATTCCCCGAAATACCTTGTGAGTTTGATCAAGAAGTGCTGGCAAACTGACCCTTCTCAGCGTCCCAGCTTCTCCTCCATCTGTAGGATTTTGCGGTACACCAAAAAGTTCCTTGCCATGAACTCAGAGTCCCAAGTCAACAACCCTGAGCTCAACGTTCTTGAGGTTCCTCCTGTTGATTGCTGCGAGATAGAGACAATGTTCCTAAAGAGCTCTTCCTCCGAGAGGTCGTCTTGTGTCTCCGCTGTGTCGCAGATACCCTATGAAATGTTTGCTTATAAGGTTGTGGAGAAAGAGAAAATGAACCCGAAAAACAGCGGTACTAAAGATGAGTGCAGCGAGCCCCACCGAAAGGAAGGGTATAGGAGTGAAAGTGATGAGCCAAGTAAACTGTGTGATGATGATAACTCATCCATTGTGGAAGATCCGCTCCCTCGAACAGCCTATCCCGCATCAGTTTGCGGTGACGCACGGACTGTTTCCTTTCAAGTGCCCTACAAGAAAACTGTTAGAATAAAGAAACAAACACATCTAAAGGCAAAAAAGGACCAAGGAACGCCAAAATTGCGGCCGACAAAATCATTACCATCTTTATCGAATCGAGTTTCAAGGACGAGAAAGGTGAATACACCATCACCGGCTCCAAGAAGTTTGAGCCCCAGTAGAAGACGACTTACCCTGGGGTCTGAATCGGATCGCAGCTCTAAAGGGAATCGATCACCATCACCGGCCCAAAGCAGGTTGAGCCCCAGTAGAAGACGGCTTACCCTGGGGTCTGAATCGGATCGCAGCTCTAAAGTGAACCGATCACCATCACCGGCTCCAAGCAGGTTGAGTCCCAGTAAAAGACGGCTTACCCTGGGGTCTGAATCGGATCGCAGCTCTAAAGGGAACCGATCACCATCACCACCACTGCCCATTCCTTCAAGGAAAAAACACGAGGGCAATTTGTCGGATCCTAAGGCCAGTTTAAGGTCGAAAAAAGTGGATCAGTCAGCATTAACTAGATATGGTAGAATGACAGATAGTTCAAAGATGAAGTTGAACAAATCTTTGAGCCCGGGAAGAATGAGACGTGCCAACACTGAGACCAATTTGAAGGGGCTCACGCCACCCCGTCCATCGAGCAATCCAGGAACATCCACAAGGACCAGAAAAAGTGATAATGTCTCAGTTTCGGACAACGGTTCAGGAATTTCAACAGGTAGGTTTTCGCCGTTGGCATTGAATCCCCCAAGCCCCTTTGAGAAGAAAAGAAACAAGCGGTCATCTTTCTGA 2793 0.4859 MDSFFACLRYVLPNSYCLNVTLRCFCRFRIEGAGMEQFRHIGEVLGSLKALMVLRDEIQINQRQCCLILEIFSLAMDTIAEEIRQNLKLEERNSKWKPLEFPLSELCRVFKEGEHYIKQCLDSKGWLGKAVTLSHHRDCVEFHIHNLLCYFPAVIEAIEIAGEVSGLHPEEKAKKKVILDRKYDVEWNDPELFQWRFGKQYLVPRGICKKLENAWREDRWRLIEAIKDKTPKEGGSGAFRKSDRGLADMLLKKLLNGSEISPIAVLVGSKDYQVRRRLARLRDFKEIQWLGQSFALRNFQGEREAHQAEVSSLLSLSHPNIVQYLCGFYDEEKQEFSLVMELMKKDLWTYMRENCGPRRQILFSVPVVVDLMLQMARGMEYLHSQNISHGQLNPYNIHLKPRNSQEGYFQAKVAGFALSSVNNGSADTSAIHDFSPFTWYAPEVLTRLEQTQNHRSSSTEKADAYSFGMICFELLTGKVPFEENHFQGDRMIQNIEVGERPLFPYHSPKYLVSLIKKCWQTDPSQRPSFSSICRILRYTKKFLAMNSESQVNNPELNVLEVPPVDCCEIETMFLKSSSSERSSCVSAVSQIPYEMFAYKVVEKEKMNPKNSGTKDECSEPHRKEGYRSESDEPSKLCDDDNSSIVEDPLPRTAYPASVCGDARTVSFQVPYKKTVRIKKQTHLKAKKDQGTPKLRPTKSLPSLSNRVSRTRKVNTPSPAPRSLSPSRRRLTLGSESDRSSKGNRSPSPAQSRLSPSRRRLTLGSESDRSSKVNRSPSPAPSRLSPSKRRLTLGSESDRSSKGNRSPSPPLPIPSRKKHEGNLSDPKASLRSKKVDQSALTRYGRMTDSSKMKLNKSLSPGRMRRANTETNLKGLTPPRPSSNPGTSTRTRKSDNVSVSDNGSGISTGRFSPLALNPPSPFEKKRNKRSSF 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00254 930 SUPERFAMILY Protein kinase-like (PK-like) 299 537 IPR011009 -
Phco4g00254 930 Pfam Protein of unknown function (DUF1221) 55 269 IPR010632 -
Phco4g00254 930 ProSiteProfiles Protein kinase domain profile. 228 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00254 930 MobiDBLite consensus disorder prediction 607 645 - -
Phco4g00254 930 MobiDBLite consensus disorder prediction 817 831 - -
Phco4g00254 930 Pfam Protein tyrosine and serine/threonine kinase 302 535 IPR001245 GO:0004672|GO:0006468
Phco4g00254 930 MobiDBLite consensus disorder prediction 695 805 - -
Phco4g00254 930 FunFam Kinase family protein 269 549 - -
Phco4g00254 930 MobiDBLite consensus disorder prediction 678 930 - -
Phco4g00254 930 MobiDBLite consensus disorder prediction 607 656 - -
Phco4g00254 930 Gene3D Transferase(Phosphotransferase) domain 1 279 560 - -
Phco4g00254 930 PANTHER SERINE-THREONINE PROTEIN KINASE 233 538 - -
Phco4g00254 930 MobiDBLite consensus disorder prediction 841 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00254 Phco-Chr4 1616012 1619113 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Phco4g00254 PK_Tyr_Ser-Thr 7.8e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00254 4 1616012 1619113 Phco4g00254 4 1616012 1619113 ECH