Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00245 ATGTCCACCACCGCAACTACAACAACATCAGAAGAAGTGAGCAGCAACGAGTGGAAAGTGATACACATGAGCGAGCAAGAGGAGGATCTCATTCACAGGATGTACAAGCTAGTCGGAGACAAGTGGAATTTGATAGCGGGTCGGATTCCGGGTCGGAAAGCAGAAGAGATAGAGAGATTCTGGATTATGAGACACACTCATGCTTTTTCTGTTACAACAAATCAAAGTAAAGCCAAACACTCTTGA 246 0.4472 MSTTATTTTSEEVSSNEWKVIHMSEQEEDLIHRMYKLVGDKWNLIAGRIPGRKAEEIERFWIMRHTHAFSVTTNQSKAKHS 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00245 81 CDD SANT 23 61 IPR001005 -
Phco4g00245 81 Gene3D - 23 81 - -
Phco4g00245 81 Pfam Myb-like DNA-binding domain 24 62 IPR001005 -
Phco4g00245 81 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 17 65 - -
Phco4g00245 81 SUPERFAMILY Homeodomain-like 24 62 IPR009057 -
Phco4g00245 81 SMART sant 19 67 IPR001005 -
Phco4g00245 81 FunFam MYB-like transcription factor 22 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00245 Phco-Chr4 1538546 1540972 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco4g00245 Myb_DNA-binding 4.4e-06 CL0123