Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00223 ATGGAATCTGTGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCACCACTTCAGTTTTTTTCCATGATGTCTCTTTCACCTGGCATAGGATCTCCCTATCCTTGGCTTAGAGAACTGAAATCTGAGGAAAGGGGTTTGTATTTGATCCATTTGTTGATCGGTTGTGCAAATCACGTAGCTAATGGTAGCCTTGAAAATGCAAACATGTTGCTTGAGCAGATTTCTCAGCTTGCCTCTCCTGATGGGGATACCATACAGCGAGTTGCTGCATATTTCACCGAAGCACTCGCTGATCGGATACTCAAAACATGGCCTGGCCTCCACAGGGCACTCAATTCCACCAGAATAGCTATGGTGTCCGATGAAATTCTTGTTCAGAAGCTCTTTTTTGAGCTTTTCCCGTTCTTGAAGATGTCATATATTCTCACAAATCAGGCTATTGTTGAAGCCATGGAAGGGGAGAAAATGGTGCATATAATTGATCTCAGTGCCACCGGGCCAGCGCAGTGGATTGCTCTCCTCCGTGTTCTGAGTGCACGCCCTGAAGGCCCTCCTCATTTGAGAATCACTGGGGTGCATCACCAGAAAGAGGTTCTGGATCAGATGGCTCATAAACTCACTGAAGAGGCAGAAAAGTTGGACATCGCATTCCAGTTCAACCCTGTTGTCAGCAAGATAGAAAATCTTGATTTTGACAAACTTCGGGTGAAAACTGGGGAGGCACTGGCAATTAGTTCCATTCTGCAGTTACACTCCCTTTTGGCCTTGGATGATGATGCCTCGAGAAGAAGATCTCCTCTTCCGTCAAACAATTCAAATGCAATTCAACTGCAGAAAATCCTGCAGATGAACCCAAACACACGCGGTGATTTGGCTGAAAAGGATATGGTTCATGGCTATAGCCCAAGTCCAGATTCAGCCTCAGCCTCGTCCTCGCCCGGGTCTTCATCTGCCTCAATGAAATCGGAGAGCTTTCTGAATGCCTTGTGGGGGTTATCACCAAAGATCATGGTTGTAACCGAGCAAGACTTCAATCACAACAGTTCAAACCTGATGGACAGGCTGCTAGAATCTCTAAACTCTTATGCTGCATTGTTTGATTGTTTGGAATGCACTGTCTCTAGAGCATCCTTGGATAGAATCAAGATTGAGAAGATGCTTTTGGGTGAGGAAATCAAGAACATTGTAGCTTGTGAGGGAGCTGAAAGAAGGGAAAGGCATGAAAAGATGGATAAGTGGATCCAGAGACTTGATTTATCTGGCTTTGCAAACGTGCCTTTTAGCTGTCAAGGTGTGACGCAGGCAATGAGGTTCTTGGAGAACTATGGTTGTAATGGGTATAGGATGAGGGAGGAAAATGGTTGTGTAGTGATTTACTGGCAGGACCGTACCTTGTTTTCTGTGACAGCTTGGAGATCAAGGAGGTAA 1431 0.4521 MESVFQEEGSSSVTSSPLQFFSMMSLSPGIGSPYPWLRELKSEERGLYLIHLLIGCANHVANGSLENANMLLEQISQLASPDGDTIQRVAAYFTEALADRILKTWPGLHRALNSTRIAMVSDEILVQKLFFELFPFLKMSYILTNQAIVEAMEGEKMVHIIDLSATGPAQWIALLRVLSARPEGPPHLRITGVHHQKEVLDQMAHKLTEEAEKLDIAFQFNPVVSKIENLDFDKLRVKTGEALAISSILQLHSLLALDDDASRRRSPLPSNNSNAIQLQKILQMNPNTRGDLAEKDMVHGYSPSPDSASASSSPGSSSASMKSESFLNALWGLSPKIMVVTEQDFNHNSSNLMDRLLESLNSYAALFDCLECTVSRASLDRIKIEKMLLGEEIKNIVACEGAERRERHEKMDKWIQRLDLSGFANVPFSCQGVTQAMRFLENYGCNGYRMREENGCVVIYWQDRTLFSVTAWRSRR 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00223 476 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 469 IPR005202 -
Phco4g00223 476 MobiDBLite consensus disorder prediction 304 318 - -
Phco4g00223 476 ProSiteProfiles GRAS family profile. 40 473 IPR005202 -
Phco4g00223 476 MobiDBLite consensus disorder prediction 292 318 - -
Phco4g00223 476 Pfam GRAS domain family 49 473 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00223 Phco-Chr4 1402109 1403539 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco4g00223 GRAS 4.9e-135 CL0063