Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00168 ATGGATCCTTTTGATGATCTTCTACCTGTGGCTTCTGTTGAACGCATTCGGCCGGGTGCGAAGTTTGTTCCGAAGGCCAAACCAAAACAGCGGCCTCGAAAGGAAGTACCTTCATCGGAAAATGCCACCTCATCTAGAGATGAACTTACTGGGAATGAATGTCAAAATGTAGTTGCTTCGACGCTAAGCGTGCCAGCGGAAGAATCTATGGGATCCATTCATCATACGCAGTTAGAATTTCCAGATTCTGAAAGGGAAATTCCTAAACAAATTAGTGTCGAGGGAGATGGTGCAGCCTCGGTGGACGATTCCACATTCACAGATACTGATCAAAATTCTACATACTTTTTAGAATCAGCATGTGAGGCTGATCCAACAGAATTGGACGGGGACTCGGTCACTAACTTCTTTTCTGAGACCAACCTCAATAATGGCACAACACAACCAGTTCACCCTGCTAATGCTGTAGAAAACAAATTGAATAATGTGGCTGCTTCATTTACAACTTGCTCAAACATTGATAGGATGAAGGAACCACCTAAAAATGGGGAAGGTTCATTTCTTGATAGCAACAATTGTTTGGAACTTATTGACAACTCATTGCAAGTTGGCACGGATTTGGGCTTCAAAAGTGCTTCAGATAATAAGGTTGCAATAGTTCAGACCGTTGATTCAAATTCTAACTTCGGAAAAGAAACAGAGTTAGTATCTGCAGAGATTGAATTGGATTCTTTCAGCGATATCCTCCCTGATCTTCCCACCAGGAATGTTCATAAATTTAAACCCAAGATTAAGCCACGACCTAGAGTAGGCAATATGCCGGCTTCTGCTTCAGAGAATGTTATGATGGAAAAATCTGTTGAGTTGCCTACTTTTTCAACACCAGACTTTCAATCTTTTCAGTCTAGTGGTGTACTAAACCAAACAACCAGTGTACCTTTGCCAACGTCAGAGATTCCTAGGACAAATTATTTGCCAAATAATTTTGGTGACACAAGCTCAAATGTTCCAATATCTGAAGACGGTAAGAGCTTGGCAGCAGCAATTCCTTCCCAATTGGATTCCCTAAATGCTATGCTTTTAGGGGATGCAGTTCATAATGGTACTAGAGATTGGCCTTCTGCCTTCGGTAAATCATCTGGAGAGGCTGCAGACATTTTTGTTGGGCTGGAATCCCTTGATGACTTTCTCGCCCAAGCTACTACTGATACAGGAAAACCAGCTCTTCATTCTTTCAATGAGAAGGGTGCAGAAGAAAATTTTGTCGCACCTGCTTGTAGTTCTATTAACTCTTTTGGGGAATGTGATACTACCCAAGTTCAAAGATGTCCTGAGTATCATACACCTCAAGATCCAGTAACCTTCAATGAAGCTACCGTTCTCAATGAGAATGATACTCACACAAACAATAGAATGTCGGAAACAGAGGAAATTGTGGACTTGAATCCCACCTATACAAGAGATGATGTCTTTGATTATCAATCCATGAAATCTGGTGAAGATCCAACTTCTGGAATTCTGGCGCATGAAGACTTGACAAATGCTGCTGACAGTTCCACATTGGCTGACTTATTGCATGCAAATGATTCAAGGGAAAAAGAAGATGCTAATCAGAGAAAAACGGATGGCACAGACACATGTTCTCTGAGGAAGAACAAAAGATCATCTATTGCTGGTGAGGAGGATAATGGTGGTAAAACCTCAAGGCAACGGAGAAAACTAGCAGCTTCTAAACCTGCAAACAGCTCATTGAATGAGGATGTTGAAGATGATAATGACCTTGACCCTCCTTATCAGTCTAATGAACACGAACTTCAAGAAAATGATGATGACTATGAAGTCGATCATTCATCCAAGAAGAATAGAGGATCAAAGAGTTCACAGAAGAAATCTGTGCCTAAAAGTAGAAAAACATCTCAAAAGCGTAAGAAGGCTGATGATGATGTACAAAAAACTAAGGAACCACCTAAAAAGTTCTCTCATTCAACCCGACGAAAGAAAAGATGCGTGGACAAGGCTCTGCTGGAAATTCCTGAGGACGAACTTGATCCTCGAACATTGCCTATTAAGGATATTATTTTACTTGCAGAACATAGGGAGCGGCAAGCGAAAAAAGAGGCAATGGCCTCAAATACGTCTCCCTCCAATCAAAGTGGTGGAGATTTTCTTCATGAGGCTGGTGCGTATAATGAACAGGAGTTCTCAGGTTCAGAAGATGGTAGAGACCCATATGATGATGATCAAGACAATGAAAGGATTACATCAACTTCCATTCTATACAATTACCAGACTTTAATGGAAAAGAGACCTAGGAGGGGTAAATGGTCTAAACAAGATACTGAACTGTTTTATGAGGCTATTAGGGAGTTGGGTACAGATTTTTCTATGATACAACAGCTTTTCCCTGATAAAACTCGCCGTCAAATTAAGTTGAAATACAAGAAGGAAGAGCGGGAACATTATTTACGGCTAAGAGATGCTATACATAACCGTTCAAAAGATCATTCTCATTATAAATTGTTGATTGAACGACTGCAACAAGCTTCCTCCAAGGAAGAGGAGGTTGTGGACCTAACAGAGGGAACTAATGAGGAGGCTGTGGAGGTTGAAACAACAATTAAGCATGATGCCGATGTAAAAGCACAGGAAGATTCTATGGCAGTTCAAAGTCCAGAGAAATCTGATGACAGTGAGGATGACTCTCTAAAATGGTCTGAGTATAAAAGTCTCTATTAG 2736 0.409 MDPFDDLLPVASVERIRPGAKFVPKAKPKQRPRKEVPSSENATSSRDELTGNECQNVVASTLSVPAEESMGSIHHTQLEFPDSEREIPKQISVEGDGAASVDDSTFTDTDQNSTYFLESACEADPTELDGDSVTNFFSETNLNNGTTQPVHPANAVENKLNNVAASFTTCSNIDRMKEPPKNGEGSFLDSNNCLELIDNSLQVGTDLGFKSASDNKVAIVQTVDSNSNFGKETELVSAEIELDSFSDILPDLPTRNVHKFKPKIKPRPRVGNMPASASENVMMEKSVELPTFSTPDFQSFQSSGVLNQTTSVPLPTSEIPRTNYLPNNFGDTSSNVPISEDGKSLAAAIPSQLDSLNAMLLGDAVHNGTRDWPSAFGKSSGEAADIFVGLESLDDFLAQATTDTGKPALHSFNEKGAEENFVAPACSSINSFGECDTTQVQRCPEYHTPQDPVTFNEATVLNENDTHTNNRMSETEEIVDLNPTYTRDDVFDYQSMKSGEDPTSGILAHEDLTNAADSSTLADLLHANDSREKEDANQRKTDGTDTCSLRKNKRSSIAGEEDNGGKTSRQRRKLAASKPANSSLNEDVEDDNDLDPPYQSNEHELQENDDDYEVDHSSKKNRGSKSSQKKSVPKSRKTSQKRKKADDDVQKTKEPPKKFSHSTRRKKRCVDKALLEIPEDELDPRTLPIKDIILLAEHRERQAKKEAMASNTSPSNQSGGDFLHEAGAYNEQEFSGSEDGRDPYDDDQDNERITSTSILYNYQTLMEKRPRRGKWSKQDTELFYEAIRELGTDFSMIQQLFPDKTRRQIKLKYKKEEREHYLRLRDAIHNRSKDHSHYKLLIERLQQASSKEEEVVDLTEGTNEEAVEVETTIKHDADVKAQEDSMAVQSPEKSDDSEDDSLKWSEYKSLY 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00168 911 MobiDBLite consensus disorder prediction 528 569 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 596 622 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 873 911 - -
Phco4g00168 911 CDD SANT 774 815 IPR001005 -
Phco4g00168 911 MobiDBLite consensus disorder prediction 528 675 - -
Phco4g00168 911 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 911 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 37 53 - -
Phco4g00168 911 ProSiteProfiles SANT domain profile. 770 818 IPR017884 -
Phco4g00168 911 ProSiteProfiles Myb-like domain profile. 767 817 IPR001005 -
Phco4g00168 911 MobiDBLite consensus disorder prediction 735 752 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 623 639 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 703 752 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 640 657 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 889 905 - -
Phco4g00168 911 MobiDBLite consensus disorder prediction 19 53 - -
Phco4g00168 911 SMART sant 771 819 IPR001005 -
Phco4g00168 911 Gene3D - 775 840 - -
Phco4g00168 911 Pfam Myb DNA-binding like 768 848 IPR039467 -
Phco4g00168 911 SUPERFAMILY Homeodomain-like 762 816 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco4g00168 Myb_DNA-bind_7 3.1e-26 CL0123