Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00147 ATGACTACCTTGTTCAAGTTCGATTTCAGATGCCTCCGGCGAGCTTCCGACTACTCGATTGTGGAAGGTTCAGTGGGGGGTGGAGGAGATGCAATTGGGGAGATGAGAGGTCCCAAAGAAGAAGATGCTATTGGAAATGATGAAGAAGAAAAGTGGCCACCATGGCTTAGGCCACTTCTCCAAACAAGTTTCTTTGTTCAATGCAAAGTCCACTCAGATTCCCACAAAAGTGAATGTAACATGTATTGTTTGGACTGTATGAATGGAGCCCTTTGTTCTGCCTGTCTTGCTTCTCACAGAGAACACAGAGCTATTCAGATAAGGAGATCTTCATACCATGATGTGATAAGGGTGTCAGAGATACAGAAATTTGTGGACATAGCAGGGGTCCAAACTTACATTATAAACAGTGCCAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGCAAAGGAGTCACCAACACCTGCCAAGTCTGTGAGCGCAGCCTTCTTGATTCTTTCAGCTTCTGCTCTCTTGGTTGTAAGATAGTTGGAACCTCCAAAAAGTTCCGGAAGAAGAAACTGTTTGCTGAGACAGATGGATCGGATTGCGAAGAATCAATAAATGGCATCGGCAATGAAAGTGCAAGAAACAAAATCCAGAGCTTCACACCATCAACACCACCACCAACAGTGGTAAATTACAGGACTGCTAAGAGGAGAAAGGGTGTCCCACATAGAGCTCCAATGGGGGCTGCCCTCATTATAGAATACCACTAA 768 0.4492 MTTLFKFDFRCLRRASDYSIVEGSVGGGGDAIGEMRGPKEEDAIGNDEEEKWPPWLRPLLQTSFFVQCKVHSDSHKSECNMYCLDCMNGALCSACLASHREHRAIQIRRSSYHDVIRVSEIQKFVDIAGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCERSLLDSFSFCSLGCKIVGTSKKFRKKKLFAETDGSDCEESINGIGNESARNKIQSFTPSTPPPTVVNYRTAKRRKGVPHRAPMGAALIIEYH 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00147 255 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 47 246 - -
Phco4g00147 255 Pfam PLATZ transcription factor 108 179 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00147 Phco-Chr4 864575 868841 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Phco4g00147 PLATZ 9.6e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00223 9 1464392 1471255 Phco4g00147 4 864575 868841 ECH
Phco4g00147 4 864575 868841 Phco4g00147 4 864575 868841 ECH