Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00142 ATGAATAAGAGTGGGGGAGGAGAGATGAGTAAGTGGCCCTTCACAGTGTCTCAGTGGCAGGAACTGGAACATCAAGCTTTGATTTACAAATACATGGTGGCGGGTCTCCCTGTGCCTCCTGATCTCGTCATTCCCATTCAGAACAGCTTCCATTCCATTTCCCAAACCTTCTTGCACCATCCCTCCTCTGCCATGAGTTATTGTTCCTTCTATGGAAAGAAGGTGGACCCAGAGCCAGGAAGATGCAGGAGAACTGATGGCAAAAAGTGGAGGTGCTCCAAGGAAGCCTTCCCAGACTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAATCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACAGTCATCATCCACTGTGACATCATTGACTGTAAATGCTGGCAGCAGCAGCAGCAGTGCAACTGGAGATTTCCAGAACCTTACCACCACAAATACATATGGTAATCCCCAAGGCACTGGCTCTGGAACAGACCAAACCCACTATGATCTGGATTCCATTCCCTATGGGATCCCAAGTAAAGAATACAGGTATTTTCAAGGATCAAAAGGTGATGGTGGTGAACATAGTTTGTCGTCCAAAACTTTTGGAAGCAACAACAAGGTTGTCCGCATGGAGTCACAGCAGGTGGATGCCTCTTTGATGCCACTGGGAGTAGCCTCATTCTCCACATTTAGATCAAGTAATAATTCCATGTTGCAGGGAGATTATCAGCAGCAGCCTTCTTTCTTATGTAGTGAATATGGCTCAGGAGAAACTATGAAGCAAGAGGGTCAGTCCCTTCAACCTTTCTTTGATGAATGGCCTAAAAGCAGGGACTCATGGTTGGGTCTGCAAGATGAGAGATCCAATCACACAACTTTCTCCACCACTCAACTCTCAATATCCATTCCTATGTCATCATCAAATTTCTCTACAACTACCTCTCAATCCCCACATGGTGAGATTTAA 981 0.4628 MNKSGGGEMSKWPFTVSQWQELEHQALIYKYMVAGLPVPPDLVIPIQNSFHSISQTFLHHPSSAMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAFPDSKYCERHMHRGRNRSRKPVESQTMTQSSSTVTSLTVNAGSSSSSATGDFQNLTTTNTYGNPQGTGSGTDQTHYDLDSIPYGIPSKEYRYFQGSKGDGGEHSLSSKTFGSNNKVVRMESQQVDASLMPLGVASFSTFRSSNNSMLQGDYQQQPSFLCSEYGSGETMKQEGQSLQPFFDEWPKSRDSWLGLQDERSNHTTFSTTQLSISIPMSSSNFSTTTSQSPHGEI 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00142 326 PANTHER GROWTH-REGULATING FACTOR 5 10 313 IPR031137 GO:0005634|GO:0006351|GO:0032502
Phco4g00142 326 MobiDBLite consensus disorder prediction 108 148 - -
Phco4g00142 326 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Phco4g00142 326 Pfam QLQ 13 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco4g00142 326 ProSiteProfiles QLQ domain profile. 13 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco4g00142 326 MobiDBLite consensus disorder prediction 117 148 - -
Phco4g00142 326 SMART QLQ_2 12 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Phco4g00142 326 Pfam WRC 77 119 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00142 Phco-Chr4 834449 837687 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Phco4g00142 WRC 7.9e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g00142 4 834449 837687 Phco4g00142 4 834449 837687 ECH