Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00121 ATGGATTCAGAAGGCGGGATTGTTAGGACACCAAAGAGGGAATTGGAAGCAGAAGGGGTTCTGAATTCAAAGATGAAGGGTTCTGGAAACATAAGCAGTAAGGATATGATATTCAGAGCTGATAAGATTGATCTCAAGAGTTTGGATGCCCAGCTGGAAAAGCACTTGAGCAGGGTTTGGTCAAGGAGCACTGAGACAAAACGGCCCAAAGAAGAGTGGGAGGTTGATTTGGCCAAATTGGATCTACGATATGTTGTGGCTCATGGAGCATATGGTACTGTATACAGGGGCACGTATGATACCCAAGACGTTGCTGTGAAAGTATTGGACTGGGGTGAGGATGGTGTAGCTACTCCTGCTGAAGCTGCTGCTTTAAGGGCATCTTTTAGACAGGAGGTTGCTGTCTGGCACAAACTTGACCATCCTAATGTGACAAAATTTGTTGGAGCTTCAATGGGGACTTCAAATCTTAAGATTCCCTCAAAAACCGCTCCGTATGGAGAGGAAGAGTCCCTTCCTGCTAGGGCATGCTGTGTCATTGTTGAGTTTATCTCTGCTGGGACACTAAAGCAATACTTGATAAAAAATAGGAGGAAGAAACTTGCTTACAAGGTTGTGGTTCAGCTGGCTTTGGACCTTGCAAGGGGTCTTAGTTATCTACACTCGAAGAAAATTGTTCATAGAGATGTTAAATCAGAGAATATGTTACTAAATCCTAATCGGAATCTAAAAATAGCTGATTTTGGAGTTGCTCGGGTTGAAGCTATGAATCCAAGTGACATGACAGGTGAAACTGGAACCCTTGGATATATGGCCCCAGAGGTTCTGGATGGGAAGCCTTACAACAGGAGATGTGATGTCTATAGCTTTGGCATTTGCTTGTGGGAAATTTACTGCTGTGATATGCCTTATCCAGATCTAAGCTTTGCTGATGTGTCATCTGCAGTTGTTCGCCATAATTTACGACCAGACATTCCAAGGTGTTGTCCAAGTTCCTTGTCAAACATCATGCGGAAATGTTGGGATGCAAATCCGAACAAGCGCCCGGAAATGGAAGAGGTGGTGAAAATGCTGGAAGCACTTGATACCAGCAAAGGTGGTGGCATGATACCAGAAGATCAGAGTCCAGGGTGCTTCTGTTTTGCTCCAACCCGTGGCCCTTGA 1164 0.4476 MDSEGGIVRTPKRELEAEGVLNSKMKGSGNISSKDMIFRADKIDLKSLDAQLEKHLSRVWSRSTETKRPKEEWEVDLAKLDLRYVVAHGAYGTVYRGTYDTQDVAVKVLDWGEDGVATPAEAAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPSKTAPYGEEESLPARACCVIVEFISAGTLKQYLIKNRRKKLAYKVVVQLALDLARGLSYLHSKKIVHRDVKSENMLLNPNRNLKIADFGVARVEAMNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRHNLRPDIPRCCPSSLSNIMRKCWDANPNKRPEMEEVVKMLEALDTSKGGGMIPEDQSPGCFCFAPTRGP 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00121 387 Gene3D Transferase(Phosphotransferase) domain 1 186 369 - -
Phco4g00121 387 SUPERFAMILY Protein kinase-like (PK-like) 59 358 IPR011009 -
Phco4g00121 387 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Phco4g00121 387 PRINTS Tyrosine kinase catalytic domain signature 181 194 IPR001245 GO:0004672|GO:0006468
Phco4g00121 387 PRINTS Tyrosine kinase catalytic domain signature 285 307 IPR001245 GO:0004672|GO:0006468
Phco4g00121 387 PRINTS Tyrosine kinase catalytic domain signature 329 351 IPR001245 GO:0004672|GO:0006468
Phco4g00121 387 PRINTS Tyrosine kinase catalytic domain signature 219 237 IPR001245 GO:0004672|GO:0006468
Phco4g00121 387 Gene3D Phosphorylase Kinase; domain 1 69 162 - -
Phco4g00121 387 FunFam Serine/threonine-protein kinase HT1 184 369 - -
Phco4g00121 387 CDD STKc_MAP3K-like 86 358 - -
Phco4g00121 387 FunFam Kinase suppressor of Ras 1 69 164 - -
Phco4g00121 387 SMART serkin_6 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00121 387 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00121 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
Phco4g00121 387 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 62 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00121 Phco-Chr4 755394 757796 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco4g00121 PK_Tyr_Ser-Thr 1.8e-59 CL0016