Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00086 ATGTCTTTAGCTATCTTTTTGCCTTGCATTATTGCACTTCTTTCACTTTCACATTTGAATGGCTTACATGCCATTCAATCAAATACAAGCATCGCTGCGGGATCCAATTCTACATGGAAGTCTTCCTCCACTGATTTTGAATTTGGATTCTACGCTCTTCCCAATGGTCTCTTTCTTGTGGGAATATGGTTTGGGAGAATCCAAGAAAGAACGTTGGTATGGTACCTGGCTCCCCCTGTGGAGCAAAATTCTCAAATCCAATTCACTTCTGCAGGACAACTTGTGGTAGTATACCCAAATGGGACTACTGCTCAGACCATATATAGTGGAGGAAACGGTGGGGCGGCAACATCTGCCACCATGCAAGATGATGGTAATTTTGTCATGAAGAACTCCAACTTAAGACCTGTGTGGGAAAGTTTCAACTTTTCAGCCAACACAATCTTGCCGGGCCAAACCTTGCAGACTAATCAAAGCCTCTATTCCAAGGGGAGAGGACCTTCAAACTACTCATTGGGAAATTTCATGCTACAAATGCAAGGTGATGGCAACTTGTTGCTCAAAGCTCACCAATGGTCTGATCCTGCGTACTGGTACACTTCAACAACGACCCCGAATGTAAATTTGCTGTTTAATGCTACCACTGCTCTCATGTACCTTGTTGGCGGCACCGGGAACATCTACTCTATAACCAACACCACTCCAACCCCGGTGGAGGATTATTATCATCGTGCTATAATAGATGAGAATGGAAATTTCCAGCAATATGCATATCACAAGAGGAATGGGACGGAATGGAGCAGGGTTTGGAGAGCTGTGGAGGATCCCTGCAGAGTGAATGTTGTCTGTGGTGTTTATGGCTTGTGCACTTCTCCTGACAATGAATCAGTCAAGTGTGAATGTATTCCAGGTTATATCCCATTGGATGATCGAGATGTTTCCAAAGGGTGTCACCCACCAGCTGTCATCAATTACTGTGCAGAGACCAACTTCAAGCTCCAGGTCTTTAACGACACTGATTTTAATTTTGATACTCGTCTTCTTAGTCTCGATAGTGTTGACTTCGAAAGTTGTAACAAGGCTGTAGTAGATGATTGTAACATCGTTGCTGCAACTTATAACCATTCCACCTCCACATGTGTCAAGAAGAGACTGCCGTTACTGAATGCTAGAAACAGCTCTTCTTCAAAGGGAATGAAAGCACTGCTTAAAGTTGCTGACAGGGTTGAGTCTGGGACACCTAAAGTTCCCAAGAAGAAAAGTTTTAATGTAAGAGTCTTTTTGAAGGTTCTTCTTGCAGTTATTGCCACTCTTGCCTGTTTCTTTGGTGCTCTTGCTGTCTACTATCATCCTTTCGCTCGGAGACTAACAAGAAGAAGGAAGCATCTGAATGCAACCGCTATTGGAATCAACTTCAGGGAATTCACCTTTCAGGAGCTGCATGAAGCAACAGACGGATTCACTAGGATTCTTGGAAGGGGAGGTTCAGGCAAAGTCTATCGTGGTGCTTTAATAATAGATGGTGCAGAGATTGGTATTGCAGTAAAGACATTGGAAAAGAAAATTGAGAAAAGTGAAAGAGAATTCATGACTGAGCTCAAAATTATTGGTCGTACCCATCACAGAAATTTGGTGAGGCTTTTGGGCTTTTGCTTTGAGAGTAGCCATCGAATTATAGTATATGAGTTGATGCCAAATGGAGCACTCTCCAGTTTTCTGTTTGGAGAGGGAGAAAGGCCTCAATGGGGTCAGAGGATGGAAATGGCTCTTGGAGTCGCAAGGGGGTTGCTATACTTGCACGAAGAGTGCAACACCCAAATCATACATTGTGACATCAAGCCCGAAAATGTGTTACTTGATGCCAATTACACAGCAAAGATTGCAGATTTTGGGCTGTCCAAGCTTTTGAACAAAGATCAAACTAGAACAAACACTAATTTAAGAGGGACAATGGGATACATGGCACCTGAATGGCTAAGGAGTGCACCAATAACTGCTAAAGTTGACATATTCAGTTTTGGGGTTATGCTATTGGAGATTATTTGCTGCAGGAGGCACATTGAGTATTGTCAGGATGGAAAAAACAGTGAAGATGATGATTTGGTTCTTTCAAATTTGGTTTTGAGGTGTGTGGTGTCTAGGCAACTAGAGCTAGTGGTGAGACATGACACAGAAGTGCTGAATGATTTCAAGAAGTTTGAGGAAATGGCCTTGGTTGGACTATGGTGTGTTCATCCAAATCCGTCTCTGAGACCTTCTATGAAGCACGTGATGCAAATGCTAGATGGAACCGTGGAAGTTGGAGTTCCTCCTTTGGTTTACGATATGATAATGTCATATCAAGGCTTATAG 2352 0.429 MSLAIFLPCIIALLSLSHLNGLHAIQSNTSIAAGSNSTWKSSSTDFEFGFYALPNGLFLVGIWFGRIQERTLVWYLAPPVEQNSQIQFTSAGQLVVVYPNGTTAQTIYSGGNGGAATSATMQDDGNFVMKNSNLRPVWESFNFSANTILPGQTLQTNQSLYSKGRGPSNYSLGNFMLQMQGDGNLLLKAHQWSDPAYWYTSTTTPNVNLLFNATTALMYLVGGTGNIYSITNTTPTPVEDYYHRAIIDENGNFQQYAYHKRNGTEWSRVWRAVEDPCRVNVVCGVYGLCTSPDNESVKCECIPGYIPLDDRDVSKGCHPPAVINYCAETNFKLQVFNDTDFNFDTRLLSLDSVDFESCNKAVVDDCNIVAATYNHSTSTCVKKRLPLLNARNSSSSKGMKALLKVADRVESGTPKVPKKKSFNVRVFLKVLLAVIATLACFFGALAVYYHPFARRLTRRRKHLNATAIGINFREFTFQELHEATDGFTRILGRGGSGKVYRGALIIDGAEIGIAVKTLEKKIEKSEREFMTELKIIGRTHHRNLVRLLGFCFESSHRIIVYELMPNGALSSFLFGEGERPQWGQRMEMALGVARGLLYLHEECNTQIIHCDIKPENVLLDANYTAKIADFGLSKLLNKDQTRTNTNLRGTMGYMAPEWLRSAPITAKVDIFSFGVMLLEIICCRRHIEYCQDGKNSEDDDLVLSNLVLRCVVSRQLELVVRHDTEVLNDFKKFEEMALVGLWCVHPNPSLRPSMKHVMQMLDGTVEVGVPPLVYDMIMSYQGL 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00086 783 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 771 - -
Phco4g00086 783 ProSitePatterns Protein kinases ATP-binding region signature. 491 516 IPR017441 GO:0005524
Phco4g00086 783 Pfam D-mannose binding lectin 79 159 IPR001480 -
Phco4g00086 783 Pfam Protein kinase domain 489 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00086 783 PIRSF SRK 1 781 IPR024171 GO:0004674
Phco4g00086 783 Gene3D - 22 143 IPR036426 -
Phco4g00086 783 Gene3D - 144 282 - -
Phco4g00086 783 Gene3D Phosphorylase Kinase; domain 1 459 563 - -
Phco4g00086 783 SMART serkin_6 485 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00086 783 Gene3D Transferase(Phosphotransferase) domain 1 564 767 - -
Phco4g00086 783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Phco4g00086 783 SMART blect_4 30 144 IPR001480 -
Phco4g00086 783 ProSiteProfiles Bulb-type lectin domain profile. 22 142 IPR001480 -
Phco4g00086 783 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 564 769 - -
Phco4g00086 783 FunFam S-receptor-like serine/threonine-protein kinase 454 563 - -
Phco4g00086 783 SUPERFAMILY Protein kinase-like (PK-like) 472 772 IPR011009 -
Phco4g00086 783 ProSiteProfiles Protein kinase domain profile. 485 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00086 783 CDD STKc_IRAK 491 763 - -
Phco4g00086 783 Pfam S-locus glycoprotein domain 239 307 IPR000858 GO:0048544
Phco4g00086 783 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 203 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00086 Phco-Chr4 582985 585336 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Phco4g00086 Pkinase 2.8e-49 CL0016