Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g00055 ATGCTCAAACATACACCTTCAGCTGTGCTTTTGTTCATCGTATTTATATTTACCTCCTCTCTGAATCGCGTTTCTGCAGAAGACCCTCTTGATTTTTACTGTCCTAGTTCCAGTGAATTCCCACTGTACAACCTCAATAGTTCATTTCATGACAACCTCAACCTTGTTATGGGGTTGCTTTCCTCCATCAACGCTTCAACGGCTGGTTTCTATAACACGTCTAGAGGACAAGAGCCAAACAAAGTGTATGGACAATCACTGTGCAGAGGGGACATCACCAACTCCACAGTTTGCAAAGAATGCATTGAGAAAGCAAGCCAAGACATAATGAATAGATGCAGGAGTGAAAATGCAATGATATGGTACAACCTTTGCCAAGTGCGCTACTCCTTTCAGAGCTTTGATGTGGTGGCTTATACTGGAAAGTATCCGAAGCAGAATGATGAGGAGAAGAATGTCTCTGATCCTATTCGATTTAGGGAATACTTGACTTTTCTAATGAACAATCTCTCAGCCGAGGCTGCTTTCAATCCTGTCAAGAACATGTTTGCGGCTGGTGAAATTGACTATCCTGGGAAGAAGACAATTTATGGGTTGGTCCAATGTACGAGGGACATGTCCCTCCCAGGCTGTAGTAGTTGTTTGAGTTCCGCCTTCACAGAAATCACTACATGCTGCTCCTACAGAGAAGGTGGGATTATTCTTAGTCGTACTTGCAATATGAGGTTCCAATTGTCTCAGTTCTTCAATGCTTCTTCTGCATATCAGTTGGTTTACCCAACTTCCACAGGAAGGAAATGGAAGTCCTGGATGTTTGTGTTGATTATATGTGGGTCGATTTTTGTATTATCATTTGTTATTGGGTTGGGCATTGCATGCTTACGAGGAAGGAAAAAGAGAGACAAAGATGAAGAAATTAGTGAAAGAACGCTATTACAAGAGCTGACTACACCTAAGCATGTAGCACTCACACAAGAAGGTGACTTGATTAGTTCCGAAGAGGTGTTGTTCATGACTTTAGCTTCCATTAGGGTTGCTACTGATGACTTTTCTGATACAAATAAGCTGGGACAAGGAGGGTTTGGTGCAGTGTACAAGGGTGTTCTGCCAGATGGTAATGAAATAGCAGTTAAGAGATTGTCGAGGAAATCTTGGCAAGGCATAGAGGAATTTAAAAATGAAGTTGTGTTGATTGCCAAACTTCAACACAAGAATTTGGTGAGGCTGTTAGGTTGTGCCCTGGAGGGAGAAGAAAAGTTACTCATATATGAATTCATGTCAAACAAAAGCCTTGATCAACTTATTTTTGATCCAGAAAAACGTTCAAAACTTGATTGGAAGACATACAATGGTATTATCAATGGCATAGCGAGAGGACTACTTTATCTCCACGAGGAGTCTCGCCTTAAAATCATTCACAGAGACTTAAAGCCCAACAATGTCTTGTTAGATCACGAACTATTGGCCAAAATATCAGATTTTGGTATGGCCAGAATATTTTCTGAGAACCAGAATGCTGCAAACACCAAAAGAGTTGTGGGAACATATGGATATATGGCTCCAGAGTATGCAATGGAAGGATTGTTCAGTGTGAAATCCGATGTGTTCAGCTTTGGCGTTGTCTTGCTTGAAATCATCAGCGGAAAAAGAAGCAGTGGTTTTTACCAAACCGAACTTGCCCCGACACTGCTGGCATACGCATGGCGAGTGTGGAATGAAGGAAAAGCATTGGACTTTGTGGATTCAGTGGTGTTGGAAACATGCCCTGCATCTGAAGTTGTAAGATGCATGCACATTGGACTTCTGTGCGTGCAGGAAAATCCAGAACATAGGCCCACCATGTCAACTGTGATGCTTCTCCTGGGAAGTGAGTCAATGGGTCTTCCCCAACCAAAACAACCCGCTTTTGCTTTGAGTAAGGTGCTTCATCTCGATCCATCTACAAAAACCAATCCTTCAGATAATGAGATTATATTTTCTGATATTTTACCTCGCTGA 1998 0.4194 MLKHTPSAVLLFIVFIFTSSLNRVSAEDPLDFYCPSSSEFPLYNLNSSFHDNLNLVMGLLSSINASTAGFYNTSRGQEPNKVYGQSLCRGDITNSTVCKECIEKASQDIMNRCRSENAMIWYNLCQVRYSFQSFDVVAYTGKYPKQNDEEKNVSDPIRFREYLTFLMNNLSAEAAFNPVKNMFAAGEIDYPGKKTIYGLVQCTRDMSLPGCSSCLSSAFTEITTCCSYREGGIILSRTCNMRFQLSQFFNASSAYQLVYPTSTGRKWKSWMFVLIICGSIFVLSFVIGLGIACLRGRKKRDKDEEISERTLLQELTTPKHVALTQEGDLISSEEVLFMTLASIRVATDDFSDTNKLGQGGFGAVYKGVLPDGNEIAVKRLSRKSWQGIEEFKNEVVLIAKLQHKNLVRLLGCALEGEEKLLIYEFMSNKSLDQLIFDPEKRSKLDWKTYNGIINGIARGLLYLHEESRLKIIHRDLKPNNVLLDHELLAKISDFGMARIFSENQNAANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVVLLEIISGKRSSGFYQTELAPTLLAYAWRVWNEGKALDFVDSVVLETCPASEVVRCMHIGLLCVQENPEHRPTMSTVMLLLGSESMGLPQPKQPAFALSKVLHLDPSTKTNPSDNEIIFSDILPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g00055 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 642 - -
Phco4g00055 665 Pfam Protein tyrosine and serine/threonine kinase 353 618 IPR001245 GO:0004672|GO:0006468
Phco4g00055 665 Gene3D - 33 134 IPR038408 -
Phco4g00055 665 Gene3D - 142 248 IPR038408 -
Phco4g00055 665 SMART serkin_6 350 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00055 665 FunFam Cysteine-rich receptor-like protein kinase 10 313 425 - -
Phco4g00055 665 Gene3D Transferase(Phosphotransferase) domain 1 426 627 - -
Phco4g00055 665 SUPERFAMILY Protein kinase-like (PK-like) 332 620 IPR011009 -
Phco4g00055 665 ProSiteProfiles Gnk2-homologous domain profile. 28 134 IPR002902 -
Phco4g00055 665 ProSiteProfiles Protein kinase domain profile. 350 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco4g00055 665 FunFam Cysteine-rich receptor-like protein kinase 10 144 248 - -
Phco4g00055 665 CDD STKc_IRAK 356 617 - -
Phco4g00055 665 Pfam Salt stress response/antifungal 151 244 IPR002902 -
Phco4g00055 665 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Phco4g00055 665 Gene3D Phosphorylase Kinase; domain 1 325 425 - -
Phco4g00055 665 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Phco4g00055 665 FunFam Uncharacterized protein 426 627 - -
Phco4g00055 665 ProSitePatterns Protein kinases ATP-binding region signature. 356 378 IPR017441 GO:0005524
Phco4g00055 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g00055 Phco-Chr4 350848 354197 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco4g00055 PK_Tyr_Ser-Thr 8.8e-48 CL0016