Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03301 ATGTTAAAGGAAGACGCTCTAGAGGAGGCGGAGGCTTCGCCGTTCTTGGTGAAGAAGAAGTTGCGCGACCAGGTTGAAGAAATTCGAAGGCACATCTTTAATTTCAGAAGATCAGAGGTGGAAGATTGTGTTGATAAGATGTCTAAGGATGTGAATATGCTAATTGATGGGGCAACAAATAAGTCTGTTGATTGTAGTGATGCATTTAACACTACAGAGGTTTTTCCTTCTCGAGATGCAATGTTAAATTGGGCTCGAGATGTTGCAAAAGAGAATGGATTTGTCCTTATTATTTTGAGATCAGAGACATCTACAAAACCTACAAGAACTACAAGACGTAATCAAAGGAAGACATTTATAATTTTGGGTTGCGATAGAAGTGGAAAATATAGAGGACCATACAAGAATGCATTATCCCGAAAGGTAAATGGTACTAGAAAATGTGAGTGTCCCTTTAGGTTAAGGGGAAAAGCTTTGAAAAAGGCTGAAGGATGGATTGTCAAGGTAATGTGTGGTTGTCACAATCATGACTTAGAGGAAACATTAGCAGGTCATCCATATGCAGGCCGGTTGAGTGCTGAAGAGAAGTCTTTGGTTGATGATATGACAAAGAACATGATGAAGCCAAAAGATATACTATTGACATTGAAAGATTATAACATGGATAATGTCACTACTATCAAGCAGATTTACAATGCTCGACAGGCTTATCGATCCTCTCAAAAAGGTTTAGAAATGCAATACCTACTGAAATTATTGGAACGTGAACGGTATGTGTATTGGCATAGAAAGGTGGATGATTCCAATGTTATCAGAGATATATTCTGGACACATCCAGATGCCATTAAACTTCTGGGTGCTTTCAACACTGTCTTGATAATTGATAGTATTTATACAACCACTAGGTATCCATTGCCACTGCTTGAGATTGTTGGCGTTACTTCAACAGAGTTAACATTCTCTGTGGCATTTGCTTTTGTGGAGTCTGAGCAAGCTGACAACTTCACTTGGGTACTACAGAAGTTAAGAGGATTGATTGTTAAAGATGAAGACATACCTCAGGTGATTGTGACTGACAGAGACATTTCTTTGATGAATGCAGTGCAAGTTGTCTTTCCAAGCTCTTCTAATTTGTTATGTCGGATTCATATCAACAAGAATGTGAAGGCCAAATGCATGTCGATAGTCCATCCAAAGGAGAAACAAGACTTGGTGATGGATGCATGGGATGTTGTTGTGAATTCTTCAAATGAGAGTGAATATATCCAGCGTCTGGCACTATTTGAAAAAGTTTGCTCAGGTTTTCCTAGTTTTTGTGAATATGTGAAAAAGATGTGGCTGATCCCACACAAGGAAAAGTTTGTGACTGCATGGACAAATCAAGTGATGCATTTGGGTAACACAACAACGAATAGGGTTGAGGCAACAAATTGTAAGTTAAAGAATTTGCTTCAAGATAGCAAGAATGATATGTGTAGTTATTGGGATGCTATGAATGACATGATTACTTTGCAACACACTGAGATTAAGTCGTCATTTGAGAAAAGCATAAATGTAGTGGATCATATGCAAAATACTCCAGTATACATCAAACTGCAAGGATTTGTATCAAGGAGTGCATTGAGTCATATAACTGACGAGTATGATCGAGTTAAGACTGTTGGTAATGATAGTTCTAAATGTTGTTGCATAGTTAGAACTACACATGGTCTTCCTTGTGCATGTGAACTTGCTAGGTACATTACTATGTGCCATCCTATTCCCTTGGAGGCAATTCATGTTCATTGGAAGAAGTTAAACTTTACTGATCGAGGAATGGATGACAAGGAGTTTGAGTTATCATTGCAACCTGAGTTGGATGCTTTGCTCCAGAGATTTCAGGAACTTGATTGTGCTGGGAAAATTATTCTAAAGGCTAAATTGCATGAACTGGCATTTCCTGATACAGCTTCAAAGTGTCCAACTCCTAAAATGGTAAGAATAAAGCGTGCTCCAGGGTCAAAAAGAGATAGATCAATTCATTATGATCTTTCACATTGGGAGCATGTTGATGCAATGCATCCTACCCATAGTGGCACTTCATCTTGCCCTTCATCTCATCAACTAGTCCACGAGTCTAAACGAAGAAGAGTTCTGCCAATGATGGACCAATTTCCGATTCAGATCCATCCATTTATTGAAGAAATTATCGATGTGAAAGCGGATTCAAATTGTGGTTATCGTGCTGTTGCAGCTCAACTTGGTATGGGTGAGGAATCATGGGCTTTAGTTCGTCAGGATTTGATTAGAGAGCTTCAACACTGGCAAGATATTTACACCAAACTCTTTGGTAGCAATGAACGAGTGGCTGAACTGAGGCAATCTTTGTATGTTGACAAGGAGACATCTATTAAAAAGTGGATGACCATACCAGATATGGGTTATGTAATTGCCTCAAGATATAATGTTGTTCTAGTCTCTTTATCCTTGAAGGAGTGCATGACATTTTTCCCTCTTAGAGGACGACCACCATTATCTCAGTCAAGGCACCGCCTTATTGCCATTGGCTTGGTGCATGATTGTCACTTTGTACAGGTTGCTTTGAAGGCTGAGTGTGCATTACCTCCCACTGCTTTGCAATGGTCGAGATACTGCAGTGCTGAATCTCGTTCTTGGGAAACTTCATATGTTAATCGTATGGAACATTTTAGGTCATTGTTTCCACACACAAAAAATAATTTTGTAAACGTTATTGAGGACTAA 2742 0.3902 MLKEDALEEAEASPFLVKKKLRDQVEEIRRHIFNFRRSEVEDCVDKMSKDVNMLIDGATNKSVDCSDAFNTTEVFPSRDAMLNWARDVAKENGFVLIILRSETSTKPTRTTRRNQRKTFIILGCDRSGKYRGPYKNALSRKVNGTRKCECPFRLRGKALKKAEGWIVKVMCGCHNHDLEETLAGHPYAGRLSAEEKSLVDDMTKNMMKPKDILLTLKDYNMDNVTTIKQIYNARQAYRSSQKGLEMQYLLKLLERERYVYWHRKVDDSNVIRDIFWTHPDAIKLLGAFNTVLIIDSIYTTTRYPLPLLEIVGVTSTELTFSVAFAFVESEQADNFTWVLQKLRGLIVKDEDIPQVIVTDRDISLMNAVQVVFPSSSNLLCRIHINKNVKAKCMSIVHPKEKQDLVMDAWDVVVNSSNESEYIQRLALFEKVCSGFPSFCEYVKKMWLIPHKEKFVTAWTNQVMHLGNTTTNRVEATNCKLKNLLQDSKNDMCSYWDAMNDMITLQHTEIKSSFEKSINVVDHMQNTPVYIKLQGFVSRSALSHITDEYDRVKTVGNDSSKCCCIVRTTHGLPCACELARYITMCHPIPLEAIHVHWKKLNFTDRGMDDKEFELSLQPELDALLQRFQELDCAGKIILKAKLHELAFPDTASKCPTPKMVRIKRAPGSKRDRSIHYDLSHWEHVDAMHPTHSGTSSCPSSHQLVHESKRRRVLPMMDQFPIQIHPFIEEIIDVKADSNCGYRAVAAQLGMGEESWALVRQDLIRELQHWQDIYTKLFGSNERVAELRQSLYVDKETSIKKWMTIPDMGYVIASRYNVVLVSLSLKECMTFFPLRGRPPLSQSRHRLIAIGLVHDCHFVQVALKAECALPPTALQWSRYCSAESRSWETSYVNRMEHFRSLFPHTKNNFVNVIED 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03301 913 Pfam MULE transposase domain 291 387 IPR018289 -
Phco3g03301 913 PANTHER SWIM-TYPE DOMAIN-CONTAINING PROTEIN 72 597 - -
Phco3g03301 913 CDD OTU 728 856 - -
Phco3g03301 913 ProSiteProfiles OTU domain profile. 727 850 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03301 Phco-Chr3 58625717 58630840 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Phco3g03301 MULE 7.3e-22 CL0219