Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03300 ATGGATATTTGCATTTACAAATTCATTATTTGGGTTTCATCTATTCTGTGGTTGATACGGGTGTCATCGGGAGATGTTCTTGATGACAACATCCTTATAGACTGTGGATCCCCCAAAAATACTGAGGTGGGGGCACGATTATTTCAAGCCGATAATTCCTCTGCCCACTTACTTTCAACCTCAGAGCTTATTTTGGCTAAGGCAAACTCCACCCATATTCCGTCATCTTTTGATTCAGAACTATACCAGACTGCTCGAATCTTTAGGAGTGTTTCTCAATACACATTCCCAATGAAAAAACATGGAAGGCACTGGATTCGCTTGTATTTCTTCCCTTTCAATTTTGGATATTACAATATGAGCACTGCAAAATTCTCTGCTTCTGCTCATAGCATCACACTACTCAATGATTTTCAAATATGCAGTGGTTCTTTGCTAAAAGAATTCTCTTTAAACATAACCGACAACCAGCTCGTGCTAACCTTTACCCCTTCTTTTGGTTCATTTGCCTTTATCAACGCCATAGAAGTTTTATCCATCCCTGACCACGTTATTCCTGAGCGCGTTAGCATTGTGAGCCCTAATGTGGATGATAAAGATCTGTGGAATAAGGCACTGGAGACTGCTGCTAGGGTGAATATGGGTAATCAAACTGTGTCTCCTCTTAATGATACTTTGTGGCGTCTATGGGTCTCGGATGATAGATACCTTATACACAGTAATCTCGTGGATTTTGTATCCAATGTCACAGCAGTTAATTTTACAGAAACAAACATTACTCTAGATATTGCCCCGTCCAAGGTATACGGGACCGTGACTAGATTGAGAACGGGTTCAGATCCCCGAACAAATGCTAATGTGACTTGGCTTTTTAATGTTGATCCCGGCTTTGATTATCTGGTTCGCTTTCATTTTTGTAACATTGTGAGTCTACCTCCAAACACTCTCTTCAACGTTTATATTAACTCTTGGCTTGTTTCTACAGTCGATCTTGGTAAACAAACATCAAATAAATTTGGTGCGCCATATTACATGGATGCCATCACTAGGACTAGTGGCAGCCAAAGGTTAAAAGTTAGTGTCGGTACTTTCAGTATAAGTGAAGCATCTTCTCCGGAGGCCATTCTGAATGGGCTGGAGATCATGAAAGTGAGCAACTCTAAAGATAGTCTGGTTCTAGATTCGGAGAGAAGTATGACGAAAAGAGTTGGTATCATAGTGGGTTTAGTGACAGGATCCGTGGTTGTTTTTTCGGCTACGGTTATGGCTTTACTTATGCTTTGTAGAAGAAGAAGAAGAAGAATAAACAATCTCCACACTGGTCATTTAAAAGTTGACCATTTTCCTGTAAGCGAAGTCGTAAATAACAATTATGTTGGTAAAGCCAATTTTCACAACCCAGAAATTGGGTATCGGATACCTCTTACACTAATTCAAGAGGCAACTAATAACTTCAGTGAAGATTTGATCATTGGTGCTGGTGGTTTCGGGACGGTTTACGAGGGAATTTTGAAAGATGAAACAACAGTAGCTATCAAAAGGGGGTCAAGCCAATCACAGCAAGGTCTTGCTGAGTTTCGGACTGAAATTGAGATGTTATCACAGTTTCGTCATCGTCACTTAGTATCAATGATTGGGTATTGTAACGAACAAAATGAGAGGATCATTATTTACGAGTACATGGAAAAAGGGAGCCTGAAGGACTATATGTTCGGCTCAGATGCATATAATAGACCTTGCTTAAGTTGGAGACAGAGGCTTGAGATTTGCATAGGAGCAGCCAAAGGACTACATTATCTTCACACTGGCTCTGCCAAGGCGATAATTCACCGTGATGTCAAAACGGCAAATATCCTGCTTGATGAAAATTTGATGGCCAAAGTTGCTGATTTTGGTCTTTCAAAGACTGGTCCAGAGATTGATAAGACACATGTCAGTACAGCAGTGAAAGGCAGCTTTGGGTATCTTGATCCAGAATACTTAATAATGCAACAGTTGACCGAAAAATCAGATGTTTACTCTTTTGGGGTGGTCATGTTTGAAGTACTATGTGGGAGACCGGCAATTGATCCATCACTCACAAGGGACAAGGTGAATCTAGTGGATTGGATAATGAAATGGCAGGGGAGAAGCTCAAGATATGAAATTATTGATCCTCCCATTGCGGTTGCAGGTCAGATGAAGTCAAAGTCACTCCAGATATTCATAGATATTGCCATAAATTGCTTGTCGGAACACGGAATCAATCGGCCTAGCATGGGAGATGTGTTGTGGCACTTGGAGTATGCTTTGCAACTACAAGATGTTCATGACGGATCCAATCATGTTCATGATTTGGCTTCCCAAACGTATAGCTCAGATAATGGATTATCTTCCATAGAACACAGCATGGGAAGTGTAGCAGATTTATCTGGTGTTTCCATGAGCAAGGTGTTTGCCCAAATGGTTAGGCAACACCCTTGA 2463 0.4089 MDICIYKFIIWVSSILWLIRVSSGDVLDDNILIDCGSPKNTEVGARLFQADNSSAHLLSTSELILAKANSTHIPSSFDSELYQTARIFRSVSQYTFPMKKHGRHWIRLYFFPFNFGYYNMSTAKFSASAHSITLLNDFQICSGSLLKEFSLNITDNQLVLTFTPSFGSFAFINAIEVLSIPDHVIPERVSIVSPNVDDKDLWNKALETAARVNMGNQTVSPLNDTLWRLWVSDDRYLIHSNLVDFVSNVTAVNFTETNITLDIAPSKVYGTVTRLRTGSDPRTNANVTWLFNVDPGFDYLVRFHFCNIVSLPPNTLFNVYINSWLVSTVDLGKQTSNKFGAPYYMDAITRTSGSQRLKVSVGTFSISEASSPEAILNGLEIMKVSNSKDSLVLDSERSMTKRVGIIVGLVTGSVVVFSATVMALLMLCRRRRRRINNLHTGHLKVDHFPVSEVVNNNYVGKANFHNPEIGYRIPLTLIQEATNNFSEDLIIGAGGFGTVYEGILKDETTVAIKRGSSQSQQGLAEFRTEIEMLSQFRHRHLVSMIGYCNEQNERIIIYEYMEKGSLKDYMFGSDAYNRPCLSWRQRLEICIGAAKGLHYLHTGSAKAIIHRDVKTANILLDENLMAKVADFGLSKTGPEIDKTHVSTAVKGSFGYLDPEYLIMQQLTEKSDVYSFGVVMFEVLCGRPAIDPSLTRDKVNLVDWIMKWQGRSSRYEIIDPPIAVAGQMKSKSLQIFIDIAINCLSEHGINRPSMGDVLWHLEYALQLQDVHDGSNHVHDLASQTYSSDNGLSSIEHSMGSVADLSGVSMSKVFAQMVRQHP 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03300 820 Pfam Malectin-like domain 33 384 IPR024788 -
Phco3g03300 820 FunFam Receptor-like protein kinase FERONIA 205 386 - -
Phco3g03300 820 FunFam receptor-like protein kinase FERONIA 451 560 - -
Phco3g03300 820 Gene3D Transferase(Phosphotransferase) domain 1 561 784 - -
Phco3g03300 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Phco3g03300 820 PANTHER OS07G0166700 PROTEIN 472 767 IPR045272 GO:0004714|GO:0006468
Phco3g03300 820 FunFam Receptor-like protein kinase FERONIA 561 782 - -
Phco3g03300 820 Gene3D Phosphorylase Kinase; domain 1 450 560 - -
Phco3g03300 820 Gene3D - 205 386 - -
Phco3g03300 820 Gene3D - 30 180 - -
Phco3g03300 820 ProSitePatterns Protein kinases ATP-binding region signature. 491 513 IPR017441 GO:0005524
Phco3g03300 820 SMART serkin_6 485 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco3g03300 820 CDD STKc_IRAK 491 761 - -
Phco3g03300 820 FunFam Putative receptor-like protein kinase 30 181 - -
Phco3g03300 820 Pfam Protein tyrosine and serine/threonine kinase 490 686 IPR001245 GO:0004672|GO:0006468
Phco3g03300 820 SUPERFAMILY Protein kinase-like (PK-like) 471 762 IPR011009 -
Phco3g03300 820 ProSiteProfiles Protein kinase domain profile. 485 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03300 Phco-Chr3 58621525 58623987 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Phco3g03300 Malectin_like 7.9e-30 CL0202