Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03291 ATGGAGAAACTGAATTTTGTGAAGAATGGGGAGCTCAGATTGCCCCCGGGGTTCCGTTTCCACCCAACTGACGAGGAATTGGTTGTGCAATACTTAAAGCGGAAGGTCTTCTCCTGCCCTTTGCCAGCCTCCGTCATTCCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTAGAGAAAGAAAGGTACTTCTTCAGCACCAAAGAGCCCAAATATCCTAACGGCAACCGCTCCAACAGAGCCACCAATTCAGGTTATTGGAAGGCCACTGGCTTGGACAAACAAATTCTAACTTCAAAAGGGAACCAAGTTGTGGGGATGAAGAAGACACTTGTTTTCTACAGAGGAAAGCCACCTCATGGATCTAGAACTGACTGGATCATGCATGAATATCGCCTCCTTAACGCACCCACTTCCTCTCAGTCTCAGAGCCAGAGGCAGAGCCCTGTGGTTCATGTTCCCATGGAAAACTGGGTTCTATGTCGCATATTTTTGAAGAGGAGAAGTGGTAGAAATGGGGAGGAGATGGGGAGTTTGAGAGGGAGAGTGGATAACCGGAAGGTGAGGAAGTTGAAGATGGTTTTCTATGACTTTTTGGCGCAGAACAAGACTTATTCCTCATCTTCTGCCGCCAGTGGTATTACCCATGAATCAGATGAGCATGAAGAGAGTAGTAGCTCCAATACCTTCCCTTATTTTAGAAGAAAACCTTGA 729 0.4664 MEKLNFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSCPLPASVIPEVDVCKSDPWDLPGDLEKERYFFSTKEPKYPNGNRSNRATNSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLLNAPTSSQSQSQRQSPVVHVPMENWVLCRIFLKRRSGRNGEEMGSLRGRVDNRKVRKLKMVFYDFLAQNKTYSSSSAASGITHESDEHEESSSSNTFPYFRRKP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03291 242 MobiDBLite consensus disorder prediction 211 242 - -
Phco3g03291 242 Gene3D NAC domain 23 175 IPR036093 GO:0003677|GO:0006355
Phco3g03291 242 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 207 - -
Phco3g03291 242 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Phco3g03291 242 SUPERFAMILY NAC domain 10 171 IPR036093 GO:0003677|GO:0006355
Phco3g03291 242 ProSiteProfiles NAC domain profile. 14 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03291 Phco-Chr3 58569942 58570851 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco3g03291 NAM 5.5e-36 No_clan