Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g03290 ATGGAAAAACTTAATTTTGTGAAGAACGGGGAGCTCAGATTGCCCCCGGGATTCCGTTTCCACCCAACTGACGAGGAATTGGTTGTGCAATACTTAAAGCGGAAGGTCTTCTCCTGCCCTTTGCCAGCCTCCGTCATTCCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTAGAGAAAGAGAGGTACTTCTTCAGCACCAAAGAGCCCAAATATCCTAATGGCAACCGCTCCAACAGAGCCACCAATTCAGGTTATTGGAAGGCCACTGGCTTGGACAAACAAATTCTAACTTCAAAAGGGAACCAAGTTGTGGGGATGAAGAAGACACTTGTTTTCTACAGAGGAAAGCCACCTCATGGATCTAGAACTGACTGGATCATGCATGAATATCGCCTCCTTAACGCACCCACTTCCTCTCAGTCTCAGAGCCCTGTGGTTCAAGTTCCCATGGAAAATTGGGTTCTATGTCGCATATTTTTGAAGAGGAGAAGTGGTAGTAGAAACGGGGAGGAGAAGGAGATGGATAACGGGAAGGTGAGAAAGTCGAAGATGGTTTTCTATAACTTTATGGCGCAGAACAAGAGCGATTCCTCAACTTCTGGCGGCAGTGGGGTTACCAATGAATCAGATGAGCATGAAGAGAGCAGTAGCTCCAACACCTTCCCTTATATTAGAAGAAAACCTTGA 705 0.4624 MEKLNFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSCPLPASVIPEVDVCKSDPWDLPGDLEKERYFFSTKEPKYPNGNRSNRATNSGYWKATGLDKQILTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLLNAPTSSQSQSPVVQVPMENWVLCRIFLKRRSGSRNGEEKEMDNGKVRKSKMVFYNFMAQNKSDSSTSGGSGVTNESDEHEESSSSNTFPYIRRKP 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g03290 234 Gene3D NAC domain 23 172 IPR036093 GO:0003677|GO:0006355
Phco3g03290 234 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 204 - -
Phco3g03290 234 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Phco3g03290 234 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Phco3g03290 234 SUPERFAMILY NAC domain 10 167 IPR036093 GO:0003677|GO:0006355
Phco3g03290 234 MobiDBLite consensus disorder prediction 197 234 - -
Phco3g03290 234 MobiDBLite consensus disorder prediction 197 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g03290 Phco-Chr3 58564651 58565535 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco3g03290 NAM 5e-36 No_clan